Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01125 ATGTCAAGTACTCTTGCAGCAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGCTATACTTATATGGTTTTGTTTGTCTCGCCAGAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCACAAGTGGGAAGACATGGTGCAATTGAGTTGCCTAGAGATACTAGGCGTTTTGAGATGGAAGAACTATCTCTGGCCACAAAAAGTTTCAGCGAAAAAAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGCCGTGGACTCGCTAGTCAGGAATTTGTGGATGAGGTACGTTATCTCTCATCTATTCACCACCGGAATCTCGTCAGTCTTTTAGGCTACTGCCAGGAGAACAATCTTCAGTTTCTTATATACGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCTGGTCAACAATCTCGAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTCTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACAGCTAATGTTCTTGTGGATGAAAACTTCATTTCTAAGGTGGCAGATGCTGGACTCCGCAATTTTTTGGGGAAAATTGATATTGCAGGCTCCTCTTCTCAAGCGGCAACAGATGAAATATTCCTTGCATCAGAGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGCATACAGCTTTGGGGTATTTTTGCTGGAATTGTTAAGTGGGAAAGAAGCAACAGGGTCACCATTTCCGGACTCTAATCAGAATCTGGTTGAATGGGTGCTAAGCAATGAAGACCGTGGCATGATGTCTTACACCATTGATCGGACATTGGAGAGTAGTTGTACACCTGAAGGAATGGAAGATTACATCATGCTCATGATCAGATGCATAGACCCTTCAAGTGAGAAAAGACCTGCCATGAGCTATGTGGAAATGGAACTTGATCGGATCCTAGAGAAGGAAATGAACCTGACAACAATCATGGGAGAAGGAACCCCAACTGTGACTCTTGGAAGCCAATTATTCAAATCAACAACATGA 1134 0.4347 MSSTLAAIFGGAAGAVALVGIAILIWFCLSRQRNVSRTSETGSSDPSQVGRHGAIELPRDTRRFEMEELSLATKSFSEKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSSIHHRNLVSLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQSREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFISKVADAGLRNFLGKIDIAGSSSQAATDEIFLASEVREFRRFSEKSDAYSFGVFLLELLSGKEATGSPFPDSNQNLVEWVLSNEDRGMMSYTIDRTLESSCTPEGMEDYIMLMIRCIDPSSEKRPAMSYVEMELDRILEKEMNLTTIMGEGTPTVTLGSQLFKSTT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01125 377 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 13 354 IPR047117 -
Phac1g01125 377 SUPERFAMILY Protein kinase-like (PK-like) 56 342 IPR011009 -
Phac1g01125 377 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01125 377 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Phac1g01125 377 FunFam Protein kinase superfamily protein 42 148 - -
Phac1g01125 377 Gene3D Transferase(Phosphotransferase) domain 1 149 362 - -
Phac1g01125 377 FunFam Protein kinase superfamily protein 149 362 - -
Phac1g01125 377 Pfam Protein tyrosine and serine/threonine kinase 79 344 IPR001245 GO:0004672|GO:0006468
Phac1g01125 377 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01125 Phac-Chr1 11074867 11081097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01125 63 371 Receptor kinase-like Gene Family AT3G46290 38.272 5.79e-60 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Phac1g01125 PK_Tyr_Ser-Thr 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01125 - - gmx:100305436 665.996