Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01106 ATGGAAAATTTCATATCTATTGGAGTCATTGCTGGAGGAGTTGTCGTGGGTGCTGCACTGTTGTTTGCAGCTCCAGTAATTGCATTTGTTTACTGGAAAAGAAGGAAGCCACCAGATTATTTCTTTGATGTTGCAGCTGACGAGGATCCTGAAGTTAACTTTGGTCAACTTAAAAGGTTTTCGCTGCATGAACTGCTAGTTGCAACAGATGGCTTTAATAACGAAAACATTATTGGCAGAGAGCGACCAGAATCACAAGCACCAGTTCAATGGCCAGTTCGGAAGCGTATTGCTCTAGGAGCAGCTAAGGGGCTTGCTTATTTGCATGATCATTGTAACCCAAAGATTATTCATCGTGATATCAAAGCTGCTAATGTATTATTGGATAAGGACTTTGCATGCTAA 405 0.4123 MENFISIGVIAGGVVVGAALLFAAPVIAFVYWKRRKPPDYFFDVAADEDPEVNFGQLKRFSLHELLVATDGFNNENIIGRERPESQAPVQWPVRKRIALGAAKGLAYLHDHCNPKIIHRDIKAANVLLDKDFAC* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01106 134 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Phac1g01106 134 Gene3D Phosphorylase Kinase; domain 1 41 82 - -
Phac1g01106 134 SUPERFAMILY Protein kinase-like (PK-like) 85 133 IPR011009 -
Phac1g01106 134 Pfam Protein tyrosine and serine/threonine kinase 85 131 IPR001245 GO:0004672|GO:0006468
Phac1g01106 134 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 86 133 IPR047117 -
Phac1g01106 134 Gene3D Transferase(Phosphotransferase) domain 1 83 134 - -
Phac1g01106 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01106 Phac-Chr1 10710516 10711520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01106 20 80 Receptor kinase-like Gene Family AT4G33430 67.213 3.36e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Phac1g01106 PK_Tyr_Ser-Thr 1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01106 K13418 K13416 gmx:100804180 109.768