Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01072 ATGGGTCCTTTTTGTAAAGGCTTTTCACTGGTGGAGGACGCAGTAACTGCATTTTCAACTTGTGGTGGAATAACTGATAGTATCCTCGCCCACTTTCAAGATCTCACTCCCATCCAATCTACTATCTCTGCAACTATTGATTCTCAGTCTTCCATTTGTGGTCCTGTTGGGAGCCCAGTTTCTGCTAACAAACCAAATGGAAGAAATAATGAAGTGAAAGGGGCGACTGCAACAAGTGGTTCCTCTCGTGAGCCATCTGATGAAGATGATGAAGGAGGTAACTGTGAACGAAGCACAACTGTTGAGACTAAGCGTCTTAGAAGGAAGAATTCTAATAGAGAGTCTGCAAGAAGGTCCAGAAGAAGAAAACAAGCCCATTTGGCTGACTTGGAGTGGCAAGTTGAACGGCTGAGGCAGGAAAACTCGCACTTATTCAACCAGCTTACCGATGCAAGCCAACAATTCCGTGATGCTAATACCAATAATCGAGTGCTAAAATCAGATGTTGAAGCTTTAAGAGCTAAGGTAAAGTTAGCTGAGGAAATGGTGAGAAGGGGTACAATCACCCCTTTCAACAACCAGATTCTTCCAAGCCAGACTCAAATAAGCACCGTTTCAGTTCTCAACAGCAATAATAATAATCTGCGTCGCATGGCACATGTCTCACCAACCATCACTGTGCACGGGAATGATGGTGCTTCATATGGTGGTGGAATCACTGTTAGTGGAGAAACCTCATCACCCCTTCTGCTTGGAAACTTGGATATAGCTTCCAGTGATTTCAATAGTGATAATGGTGTGAGCTCTATAACTAGCATGTGGGCTTAG 828 0.4396 MGPFCKGFSLVEDAVTAFSTCGGITDSILAHFQDLTPIQSTISATIDSQSSICGPVGSPVSANKPNGRNNEVKGATATSGSSREPSDEDDEGGNCERSTTVETKRLRRKNSNRESARRSRRRKQAHLADLEWQVERLRQENSHLFNQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEEMVRRGTITPFNNQILPSQTQISTVSVLNSNNNNLRRMAHVSPTITVHGNDGASYGGGITVSGETSSPLLLGNLDIASSDFNSDNGVSSITSMWA* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01072 275 Pfam bZIP transcription factor 102 156 IPR004827 GO:0003700|GO:0006355
Phac1g01072 275 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Phac1g01072 275 Coils Coil 120 182 - -
Phac1g01072 275 FunFam BZIP transcription factor 102 153 - -
Phac1g01072 275 MobiDBLite consensus disorder prediction 49 82 - -
Phac1g01072 275 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Phac1g01072 275 MobiDBLite consensus disorder prediction 83 109 - -
Phac1g01072 275 SUPERFAMILY Leucine zipper domain 104 154 IPR046347 GO:0003700|GO:0006355
Phac1g01072 275 CDD bZIP_plant_GBF1 105 156 IPR045314 GO:0003700|GO:0006355
Phac1g01072 275 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Phac1g01072 275 Gene3D - 103 160 - -
Phac1g01072 275 PANTHER BASIC LEUCINE ZIPPER 63 35 248 - -
Phac1g01072 275 MobiDBLite consensus disorder prediction 49 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01072 Phac-Chr1 10227263 10231702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01072 47 274 bZIP Transcription Factor Family AT5G24800 49.576 3.85e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac1g01072 bZIP_1 2.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01072 K25784 - gmx:778193 352.443