Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01045 ATGGAAAGAGAAGGCTGGAATTGGTGCTCTTGCTCTGCGCACACCCTGCTCTCAATAGTGGCTACAATCATTCTCCTATTTCAACCAGATTACTGCATCGCCAAGCGACACCCACCATGTCCTCCTTCGTCGTGCGCCCAAATTCACAACATATCTTACCCATTTCGCCTCAAAGGAGACCCAAGTCACTGCGGCGACACAAGGTATGAGTTAGATTGCGTTAACAACGCCACACTCTTAACCCTGTTCTCGGCAAAATTCCATGTACGAGATATCGACTACAAGCGATACAAAATCGTTCTTACTGACCCAGGTCAAGACGAGTACGCTAATTGCTCCTTCATCCCTCGCAATTTCTTAACGAATCGCAATTTCACGACAGCAATTGGCCCTGATGATTTCGGATCACAGCCGTTCACTTATAAGCCCTGGGAAATTATCAGAATAGGGTACTTCAACTGCGTGAATCCTGTGAGTGACGATCCACGATATGTTAAGGTGGACATGAGTCGATGTAGCAGCGGAGGGCACGTGTACGCTGTATTGGAACCAGACTTGTATGAGTTTAGTGTGAACGACATCGAGGTTGGGTGCTATCTAATGGTGGCTACGGTTTGGACACCGAAGCAGAATGTTACCCACCATAAGTGTGATGGGAAGGACACGTGCGATCTAACGGAGATTACGTTTCTTGACCGGATACCGAAGTTGAATAGTAGCTACGAAGAGATCCGTGGCTTAATAAGTGAGGGAATTCAGTTGTCGTGGTTGCCTATTATTTGCGAGGATCGATGTGGAAGGGGGACCGACTGTAAGGTTATCAATGAATCCAAGGGAGAAGTTGAGTGTCAGAAGCATTACTGTCATTACGCCTACCACACCACCGATAAGTGCGAACCATGGCAACAGATTTTGGGCTATATTCGAGCTTATTTGAGAGGCGTTATGTATGGATTAGGTAGCAGAATAACATTCAACACGAAAAAATTGAACAGGCCAGTTGGACTGCAATATTTTGATGGAGGAATATTCATAGGACGAAATGTTATATCAATATTTTTGGCTGCCAGATGTCTGTTTGGAGTTGTACTTATTCTTATGCTATTGATCTACAAATGGCGACGAAGACAGTTCTCAATATATGAAAATATTGAAAATTTCTTGCTAGATAGCCATCTAAATCCCATTAGGTATGAATACAAAGAAATAAAAAAAATGACTCGAGGTTTCAAAGTGAAATTGGGTCAAGGAGGCTTTGGTGCAGTGTATAAAGGAAAACTCCGAAGTGGGTTGGATGTAGCAGTAAAGATGTTGAACAAATCCAATGATAATGGACAAGATTTCATGAATGAAGTAGCTACCATTGGAAGAATACATCATGTAAATGTGGTACGTCTTATTGGATATTGTGTTGATGGAAAAAAGTGTGCTCTGGTTTATGAATTTATGCCAAATGGATCATTGGATAAATACATTTTCTCCAAAGAAGAAAGCACCCCTTTAAGTTATGAAAAAATATATGAAATATCTCTTGCAATAGCAAGTGGGATTGCCTATTTGCATCAAGGTTGTGATATACAAATTCTGCATTTTGATATCAAGCCTCATAATATTCTTTTAGATGAGAACTTTGTCCCGAAGGTTTCAGATTTTGGACTTGCAAAGCTACATGCTACAATTGATGGCGTTGTCAGTATGACTGCAGCAAGAGGAACATTGGGTTATATGGCTCCAGAGCTGTTTTACAAAAATGTGGGTGGGGTATCTTACAAAGCTGATGTATATAGTTTTGGAATGCTTTTAATGGAAATGGCAAGTAGGAGGAGGAACTCAAATCCTCAAGCAGAGCATTCAAGTCAACATTATTTTCCCTTTTGGATTTATGATCAATTTCAAGAAGAAAAAGAGATTGACATAAGAGATGCTTCAGAAGAGGACAATATTCTAGTGAAAAAGATGTTTTTGGTAGCACTTTGGTGTATTCAGTTAAATCCAAGTGATCGTCCTTCAATGAACAAGGTCATAGAGATGCTTGAAGGGATGATTGAAAGTCTTGAATTGCCTCCAAGGCCTTCCTTCTACAAAAATGAAACATATACATCTGATGATATTAGCCCTGGCTTCACTAAGTCCACTGATAGTGAGTTTAGTGAAAGCATAAAATTGAATTCATCAAAAAAGTATTGA 2187 0.4037 MEREGWNWCSCSAHTLLSIVATIILLFQPDYCIAKRHPPCPPSSCAQIHNISYPFRLKGDPSHCGDTRYELDCVNNATLLTLFSAKFHVRDIDYKRYKIVLTDPGQDEYANCSFIPRNFLTNRNFTTAIGPDDFGSQPFTYKPWEIIRIGYFNCVNPVSDDPRYVKVDMSRCSSGGHVYAVLEPDLYEFSVNDIEVGCYLMVATVWTPKQNVTHHKCDGKDTCDLTEITFLDRIPKLNSSYEEIRGLISEGIQLSWLPIICEDRCGRGTDCKVINESKGEVECQKHYCHYAYHTTDKCEPWQQILGYIRAYLRGVMYGLGSRITFNTKKLNRPVGLQYFDGGIFIGRNVISIFLAARCLFGVVLILMLLIYKWRRRQFSIYENIENFLLDSHLNPIRYEYKEIKKMTRGFKVKLGQGGFGAVYKGKLRSGLDVAVKMLNKSNDNGQDFMNEVATIGRIHHVNVVRLIGYCVDGKKCALVYEFMPNGSLDKYIFSKEESTPLSYEKIYEISLAIASGIAYLHQGCDIQILHFDIKPHNILLDENFVPKVSDFGLAKLHATIDGVVSMTAARGTLGYMAPELFYKNVGGVSYKADVYSFGMLLMEMASRRRNSNPQAEHSSQHYFPFWIYDQFQEEKEIDIRDASEEDNILVKKMFLVALWCIQLNPSDRPSMNKVIEMLEGMIESLELPPRPSFYKNETYTSDDISPGFTKSTDSEFSESIKLNSSKKY* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01045 728 PANTHER RUST RESISTANCE KINASE LR10-RELATED 381 698 IPR045874 GO:0004672
Phac1g01045 728 FunFam serine/threonine-protein kinase PBS1-like 381 482 - -
Phac1g01045 728 MobiDBLite consensus disorder prediction 696 728 - -
Phac1g01045 728 Pfam Protein tyrosine and serine/threonine kinase 411 678 IPR001245 GO:0004672|GO:0006468
Phac1g01045 728 SMART serkin_6 408 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01045 728 FunFam PR5-like receptor kinase 483 689 - -
Phac1g01045 728 Gene3D Phosphorylase Kinase; domain 1 386 482 - -
Phac1g01045 728 MobiDBLite consensus disorder prediction 696 719 - -
Phac1g01045 728 ProSiteProfiles Protein kinase domain profile. 408 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01045 728 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Phac1g01045 728 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
Phac1g01045 728 CDD STKc_IRAK 414 681 - -
Phac1g01045 728 Gene3D Transferase(Phosphotransferase) domain 1 483 688 - -
Phac1g01045 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Phac1g01045 728 SUPERFAMILY Protein kinase-like (PK-like) 393 679 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01045 Phac-Chr1 9874965 9881086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01045 18 694 Receptor kinase-like Gene Family AT5G38260 32.948 2.79e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g01045 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01045 - - gmx:100820366 1060.44