Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01044 ATGAAAAAAGAAAGCTGGAATAGCTGCTCTTGCTCTGCGCACACCCTGGTGTTAACAGTGGCTATAATTGTTCTTCTATTCCAACCAGAATACGGCATCGCTAAGCGATACCCACCATGTACTCCATCGTCATGCGCCCAAATTCGCAACATATCTTACCCATTTCGCCTCAAAGGAGATCCAAGTCATTGTGGCGACACAAGGTATGAGTTAGATTGCGTTAACAACGCCACACTCTTAACCCTGTTCTCGGCAAAATTCCATGTACGAGATATCGACTACAAGCGATACAAAATCGTTCTTACTGATCCAGGTCAAGACGAGTACGCTAATTGCTCTTTCATCCCTCGCAATTTCTTAACGGATCGCAATTTCACCGAAGCGGTTGTCCCAGATGATGTCGGATCACAGCCGTTCACTTATGGCCACTGGGCAACTATCATCAGAATAGGGTACTTCAACTGCGTGAATCCTGTGAGTGACGATCCACGATATGTTAAGGTGGACATGAGTCGATGTGACAGCGGAGGGCACGTGTACGCTGTATTGGAACCAAACTTGTATAATAAGTTTAGTGTGAAGGACATCAAGGTTGGATGCGATCTAATGGTGGCCACGGTTTGGACACCGAAGCAGAATGTTACCATCTATGAGTGTGGTTGGGGAGGGTGCAGTTGGCATACTGCGATACTGGACCGGATACCGGAGGTGAATGTTAGCTACGATGAGATCCGTGGCGTGATAAGTGTGGGAATTGAGTTGTCGTGGTTGCCTGTTATTTGCGAGAATCGATGTGGAAGGGGGACCAACTGTCAGGTTTTTAATGAATCCAAGGGAGAAGTCCTGTGTGAGAAGTATTCCTGTAATTACATCTACCAAACTACCACCGAAAAGTGCGAACCATGGCAACAGATTTTGCGCTACATTGGAGCTTATCTTATAAGCGTTATTTCTGGAATAGGTAGCAGAATAACATTCAATACAAAACAATTGGACAACGAAGTTGGAGTGCAATCTTCTGATGGAGGAATATTCATTGGACGAAATATTATACCAATATTTTTGGCTGCAAGATATTTTTTCGGAGTTGTACTTATTCTTTTGCTATTCATCTACAAATGGCGACGAAGACATTTTTCAATATATGAAAATATTGAAAATTTCTTGCTAGATAGCCATCTAAATCCCATTAGGTACGAATACAAAGAAATAAAAAAAATGACTCGAAGTTTCAAAGTGAAATTGGGCCAAGGAGGCTTTGGTGTTGTATATAGAGGAAAACTTCGAAGTGGGTTGGATGTAGCAGTAAAGATGTTGAGCAAATTCAATGATAATGGACAAGATTTCATGAATGAAGTAGCTACCATTGGAAGAATACATCATGTAAATGTGGTACGTCTTATTGGATATTGTGTTGATGGAAAAAAGCGTGCTCTAGTTTATGAATTTATGTCAAATGGATCATTGGATAAATACATTTTCTCCAAGGAAGAAAGCACCCCTTTAAGCTATGACAAAATATATGAAATATCTCTTGGAATAGCAGGTGGGATTGCATATTTGCATCAAGGTTGTGATATGCAAATTCTGCATTTTGATATCAAGCCTCATAATATTCTTTTAGATGACAACTTTGTTCCGAAGGTTTCAGATTTTGGACTTGCAAAGCTACATGCTACAATTAATGGCATTGTCAGTATGACTGCAGCAAGAGGAACATTGGGTTATATGGCTCCAGAGTTGTTTTACAGAAATGTGGGCGGGGTATCTTATAAAGCTGATGTATATAGTTTTGGAATGCTTTTAATGGAAATGGCAAGTAGGAGGAGGAACTCAAATCCTCAAGCAGAGCATTCAAGTCAACATTACTTTCCTTTTTGGATTTATGATCAATTTCAAGAAGAAAAAGAGATTGACATAAGAGATGCTTCAGAAGAGGACAATATTCTAGTGAAAAAGATGTTATTGGTAGCACTTTGGTGTATTCAGTTAAATCCAAGCGATCGTCCTTCAATGAACAAGGTCATAGAGATGCTTGAAGGGATGACTGAAAGTCTTGAATTGCCTCCAAGGCCTTCCTTCTACAAAAACGAAACATATAAACCTGATGATATTAGTCCTGGCTTCACTAATTCAAGTGATAGTGAGTTTAGTGAAAACATAAAATTGGGTTCACCAAAGAGTATTGACAAGGACATAAGTAATACTACTTAA 2214 0.3979 MKKESWNSCSCSAHTLVLTVAIIVLLFQPEYGIAKRYPPCTPSSCAQIRNISYPFRLKGDPSHCGDTRYELDCVNNATLLTLFSAKFHVRDIDYKRYKIVLTDPGQDEYANCSFIPRNFLTDRNFTEAVVPDDVGSQPFTYGHWATIIRIGYFNCVNPVSDDPRYVKVDMSRCDSGGHVYAVLEPNLYNKFSVKDIKVGCDLMVATVWTPKQNVTIYECGWGGCSWHTAILDRIPEVNVSYDEIRGVISVGIELSWLPVICENRCGRGTNCQVFNESKGEVLCEKYSCNYIYQTTTEKCEPWQQILRYIGAYLISVISGIGSRITFNTKQLDNEVGVQSSDGGIFIGRNIIPIFLAARYFFGVVLILLLFIYKWRRRHFSIYENIENFLLDSHLNPIRYEYKEIKKMTRSFKVKLGQGGFGVVYRGKLRSGLDVAVKMLSKFNDNGQDFMNEVATIGRIHHVNVVRLIGYCVDGKKRALVYEFMSNGSLDKYIFSKEESTPLSYDKIYEISLGIAGGIAYLHQGCDMQILHFDIKPHNILLDDNFVPKVSDFGLAKLHATINGIVSMTAARGTLGYMAPELFYRNVGGVSYKADVYSFGMLLMEMASRRRNSNPQAEHSSQHYFPFWIYDQFQEEKEIDIRDASEEDNILVKKMLLVALWCIQLNPSDRPSMNKVIEMLEGMTESLELPPRPSFYKNETYKPDDISPGFTNSSDSEFSENIKLGSPKSIDKDISNTT* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01044 737 MobiDBLite consensus disorder prediction 704 722 - -
Phac1g01044 737 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Phac1g01044 737 FunFam serine/threonine-protein kinase PBS1-like 382 483 - -
Phac1g01044 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Phac1g01044 737 SUPERFAMILY Protein kinase-like (PK-like) 394 680 IPR011009 -
Phac1g01044 737 MobiDBLite consensus disorder prediction 690 737 - -
Phac1g01044 737 FunFam PR5-like receptor kinase 484 690 - -
Phac1g01044 737 PANTHER RUST RESISTANCE KINASE LR10-RELATED 382 698 IPR045874 GO:0004672
Phac1g01044 737 ProSitePatterns Protein kinases ATP-binding region signature. 415 437 IPR017441 GO:0005524
Phac1g01044 737 Gene3D Phosphorylase Kinase; domain 1 387 483 - -
Phac1g01044 737 SMART serkin_6 409 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01044 737 CDD STKc_IRAK 415 682 - -
Phac1g01044 737 ProSiteProfiles Protein kinase domain profile. 409 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01044 737 Pfam Protein tyrosine and serine/threonine kinase 411 679 IPR001245 GO:0004672|GO:0006468
Phac1g01044 737 Gene3D Transferase(Phosphotransferase) domain 1 484 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01044 Phac-Chr1 9865276 9871139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01044 14 695 Receptor kinase-like Gene Family AT5G38260 34.286 1.80e-109 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g01044 PK_Tyr_Ser-Thr 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01044 - - gmx:100820366 996.497