Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01042 ATGGAAAATGAAGGCTGGAATAGGTGTTCTTGCTCTGCACGCACTCTGGTGTCAATAATGGCTACAATTATTCTCCTATTCCAACCAGATTACTGCATCGCTAAGCGGCAACCACCATGTCCTCCTTCATCATGTGGCCAAATTCGCAACATATCTTACCCATTTCGCCTCAAAGGCGACCCAAACCAATGCGGCGACCCAAGGTATGAGCTAGACTGCGTTAACAACGCCACTCTCTTAACCTTGTTCTCGGCAAAATACCGTGTACGAGATATCGACTACGAGCGATACAAAGTCGTTGTGAGTGACCCGGGTCGAGAGGAGGAGGGGGCTAATTGCTCCTTCATCCCTCGCAATTTCTTAACGGACAGTAATTTCAGGCCCAAGGGTCTGGTTGGCCCGGATGATTTCGGATCGCAGCCGTTCACTTGGGAACCCTGGTATACTTTCAGAATAGGGTACTTCAACTGCGTGAATCCTGTGAGTGACGATCCACGGTATGTTAAGGTGGACAGAGGTGAATGTGGCAGAGGAGGGCACGTGTACGCTGTTTTGGAAGCATCCCTGTATGAGTGCCGGGTAAAGGACATCAAGGTTGGGTGCGATCTAATGGTGGCTACAGTGGTTGATTGGACACCGAAGGAGAATGTTAGTTACGATGAGATCCGTGGCGTGATAAGTGAGGGAATTCGGTTGTCGTGGTTGCCTGTTATTTGCGAGAATCGATGTGGAAGGGGAACCCACTGTAAGGTTATCAATGAATCCAAGGGAGAAGTTGAGTGTGAGAAGCATTCCTGCCATTACGCCTACCAAACTACCGATAAGTGCGAACCTTGGCAACAGATTTTTGGCTATATTCGAGCTTATCTTAGAGGCATTATTTTTGGAATAGGTAGCAGAATAACATTCAGCACGAAACAATTGGACAACGCAGTTGGACTACAATTTTTTGATGGAGGAATATTCATAGGACGAAATATTATACCAATATTTTTGGCTGCCAGATATCTGTTTGGAGTTGTACTTATTCTTCTACTATTCATCTACAAATGGAGACGAAGACATTTTTCAATATATGAAAATATTGAAAATTTCTTGCTAGATAGCCATCTAAATCCTGTTAGGTATGAATACAAAGAAATTAAAAAAATGACTGGAGGTTTTAGAGTGAAATTGGGTCAAGGAGGCTTTGGAGCTGTATATAAAGGAAAACTCCGAAGTGGGTTGGATGTAGCAGTAAAGATGTTGACGAAATCCAATGATAATGGACAAGATTTCATGAATGAAGTAGCTACCATTGGAAGAATACATCATGTAAATGTGGTGCGTCTTATTGGTTATTGTGTTGATGGAAAAAAGTGTGCCCTGGTTTATGAATTCATGCCAAGTGGATCATTAGATAAATACATTTTCTCCAAAGAAGAAAGTACTCCTTTAAGCTATGAGAAAATATATGAAATATCTCTTGGAATAGCAGGTGGGATTGCATATTTACATCAAGGTTGTGATATGCAAATTCTGCATTTTGATATCAAGCCTCATAATATTCTTTTAGATGATAATTTTGTTCCAAAGGTTTCAGACTTTGGACTTGCAAAGCTACATGCTACAATTGATGGTGTTGTGAATATCACTGCAGCAAGAGGAACATTGGGTTATATGGCTCCAGAGTTGTTTTACAAAAATATGGGTGGGGTATCTTATAAAGCTGATGTATATAGTTTTGGAATGCTTTTAATGGAAATGGCAAGTAAGAGGAGGAACTCAAATCCTCAAGCAGAGAACTCAAGTCAACATTACTTTCCCTTTTGGATTTATGATCAATTTCAAGAAGAAAAAAATATTGACATAAGAGATGCTTCAGAAGATGACAATATTCTAGTGAAAAAGATGTTCTTGGTAGCACTTTGGTGTATTCAATTAAATCCAAGTGATCGTCCTTCAATGAATAAGGTGATAGAGATGCTTGAAGGGATGATTGAAAGCATTGAATTGCCTCCAAGGCCTTCATTTTATAAAAATGAAACATATAGACGTGATGATACTAATCCTGACTTCACTGAGTCCATTTACTCAAATAGTCAGCTTGGTAAAAGAGTAACACCAGATTCACAAAAGAGTATTGGCAAGGACATAAGTAATATAACGTAA 2151 0.4012 MENEGWNRCSCSARTLVSIMATIILLFQPDYCIAKRQPPCPPSSCGQIRNISYPFRLKGDPNQCGDPRYELDCVNNATLLTLFSAKYRVRDIDYERYKVVVSDPGREEEGANCSFIPRNFLTDSNFRPKGLVGPDDFGSQPFTWEPWYTFRIGYFNCVNPVSDDPRYVKVDRGECGRGGHVYAVLEASLYECRVKDIKVGCDLMVATVVDWTPKENVSYDEIRGVISEGIRLSWLPVICENRCGRGTHCKVINESKGEVECEKHSCHYAYQTTDKCEPWQQIFGYIRAYLRGIIFGIGSRITFSTKQLDNAVGLQFFDGGIFIGRNIIPIFLAARYLFGVVLILLLFIYKWRRRHFSIYENIENFLLDSHLNPVRYEYKEIKKMTGGFRVKLGQGGFGAVYKGKLRSGLDVAVKMLTKSNDNGQDFMNEVATIGRIHHVNVVRLIGYCVDGKKCALVYEFMPSGSLDKYIFSKEESTPLSYEKIYEISLGIAGGIAYLHQGCDMQILHFDIKPHNILLDDNFVPKVSDFGLAKLHATIDGVVNITAARGTLGYMAPELFYKNMGGVSYKADVYSFGMLLMEMASKRRNSNPQAENSSQHYFPFWIYDQFQEEKNIDIRDASEDDNILVKKMFLVALWCIQLNPSDRPSMNKVIEMLEGMIESIELPPRPSFYKNETYRRDDTNPDFTESIYSNSQLGKRVTPDSQKSIGKDISNIT* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01042 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 359 675 IPR045874 GO:0004672
Phac1g01042 716 ProSiteProfiles Protein kinase domain profile. 386 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01042 716 Pfam Protein tyrosine and serine/threonine kinase 390 656 IPR001245 GO:0004672|GO:0006468
Phac1g01042 716 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Phac1g01042 716 SMART serkin_6 386 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01042 716 FunFam serine/threonine-protein kinase PBS1-like 359 460 - -
Phac1g01042 716 Gene3D Phosphorylase Kinase; domain 1 363 460 - -
Phac1g01042 716 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Phac1g01042 716 FunFam PR5-like receptor kinase 461 667 - -
Phac1g01042 716 SUPERFAMILY Protein kinase-like (PK-like) 371 657 IPR011009 -
Phac1g01042 716 MobiDBLite consensus disorder prediction 697 716 - -
Phac1g01042 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Phac1g01042 716 CDD STKc_IRAK 392 659 - -
Phac1g01042 716 Gene3D Transferase(Phosphotransferase) domain 1 461 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01042 Phac-Chr1 9832317 9837352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01042 18 672 Receptor kinase-like Gene Family AT5G38260 34.770 5.48e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g01042 PK_Tyr_Ser-Thr 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01042 - - gmx:100820366 1103.2