Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01041 ATGAAAAGACGAGTAAGAATAGCTATCATCGTCATTCTTCTACTTCTGCAAACTTGCGCAACAGCGCTCATCCCCAACTGTCCTGCTTCCTCCTGCGGCAACATTCCCAACATAACTTACCCCTTTCGACTCACCACCGACCCATCCCACTGCGGCGACATCAGGTACCAATTGCATTGTCAGAACAACGCCACTCTTCTAACCCTGTTTTCGGGTACATACAAAGTCCAACAAATCGATTACAAGAGATACAAAATTCGAGTGAGTGATGCAGAGGGCGGTACCTGCTCCTCCATGCCTCGCTATTTCTTGCACTCTGGTAATTTCAGTAACGAGTTTCTGGGTCCTGGAAGGGATCCGCTAAAATTGGACCCATTGCTTCAACCTTCAATAGCTTATTTCAACTGTAGCGATCCAATCACTGATGATCCTAGATATTTTGCTGTGGAAGGCAGAGGTTGTGAGCACATAGGACACGTGTATGCTGTAGTTAGGGATTCGCGAAATGGTTATGGTTTTGGTGTGAAGGACATCAAGGTTGGGTGCCAGCTGAAGGTGGCTACTTTCGCCACTGCGCGTGACCACAAGAAGTTCAACCAAGCAGTTTCGTATGGTGAAATTTACAAAATGCTCTCTCAGGGATTTGAGCTCTCTTGGTTGTATGTTATTTGTGAAGATCAATGCGGAAAGGGAAGAGATTGCATTGTTGTGGATGAATCCACTGCTGAAGTCCGATGTGACCCGCAAAATTGCCAATATCTCTACGAACAACCTAACACAGTCATATACAAGTGCAGCAGCGGTTCAGAAAACATAATTTCCGCTATAGTTTTATTTTGCATCGGTCTTTACAGAGGATTGATGCAAAATTTTGGCTTGAATAAAGCTACAGGATATGACGATGAGAGCATAGCTGAAATAGGAAAAAGCGTTGGAAGGTACATTCTACCATACTTTATAATACGGTTTCTATTTGGTGTGGTAGCTTTTGTTGTGTTGTTGATGTATAAATGGGGAAGAAGACATAAATCGAAGTATGAAAATATTGAAGCTTTTCTACAAGAAAACACTTTCATGCCAATAAGATACTCATATAAAGAAATAAAGCACATGAGTAGGGGTTTTAAGGAAAAGCTAGGTCAAGGAGGATTTGGCTTGGTATACAAAGGAAAGTTGCGCAGTGGGTCATTTGTTGCGATAAAGATGTTGAGTAAATCAAAGTCTAATGGGCAAGATTTCATCAGTGAAGTTGGTACTATTGGAACAATACATCATACAAATGTGGTGCGACTTATTGGATTTTGTGTTGAATCATCAAATCGCGCTCTTGTTTATGAATTCATGCCTAATGGTTCTCTTGATAAATATATCTTCTCCAAACAAGATAGTGTCTCTTTAACTCAGAGACAAATATATGAGATATCTCTTGGAGTGGCTCGTGGAATTGCTTATTTGCATGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCACATAACATCCTTCTGGACGAAAACTTTATCCCAAAGGTTTCAGACTTTGGCTTGGCAAGGCTTTATCCTATGGACAAAAGTATTATCACTTTGACTGATGCAAGGGGAACACTTGGATACATGGCCCCTGAGTTATTTTATCATAATATGGGGAGAGTATCACACAAATCAGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAATAAAAAAAGAAATTTTAATCCACATGCAGATGATTCAATTGAACTTTTTTTTCCTTTTTGGATATACAATGAATTGAGTGGAGAAAATGAGATAGAAGGGGAAAGTGTTAGCAAGCAGGAATACAATAATGAGGTAAAGAAGATGTTTTTAGTAGCATTATGGTGTATACAATCAAAACCATGTGATCGGCCTCCAATGAACAAAGTAGTGGAGATGCTCGAAGGAGAACTTGACAACATTGAAATGCCTTCAAAACCTTTCCTATATCAGGTAAATGATCATAATATTAAATCTTTCCAAACACTTTCAAATGATTCTAGTGGATCAACAAGTTATACTGGGGATAATACTGTTCTTATTTCTTCTGAACATTCTACTTGA 2094 0.3921 MKRRVRIAIIVILLLLQTCATALIPNCPASSCGNIPNITYPFRLTTDPSHCGDIRYQLHCQNNATLLTLFSGTYKVQQIDYKRYKIRVSDAEGGTCSSMPRYFLHSGNFSNEFLGPGRDPLKLDPLLQPSIAYFNCSDPITDDPRYFAVEGRGCEHIGHVYAVVRDSRNGYGFGVKDIKVGCQLKVATFATARDHKKFNQAVSYGEIYKMLSQGFELSWLYVICEDQCGKGRDCIVVDESTAEVRCDPQNCQYLYEQPNTVIYKCSSGSENIISAIVLFCIGLYRGLMQNFGLNKATGYDDESIAEIGKSVGRYILPYFIIRFLFGVVAFVVLLMYKWGRRHKSKYENIEAFLQENTFMPIRYSYKEIKHMSRGFKEKLGQGGFGLVYKGKLRSGSFVAIKMLSKSKSNGQDFISEVGTIGTIHHTNVVRLIGFCVESSNRALVYEFMPNGSLDKYIFSKQDSVSLTQRQIYEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLARLYPMDKSIITLTDARGTLGYMAPELFYHNMGRVSHKSDVYSFGMLLMEMANKKRNFNPHADDSIELFFPFWIYNELSGENEIEGESVSKQEYNNEVKKMFLVALWCIQSKPCDRPPMNKVVEMLEGELDNIEMPSKPFLYQVNDHNIKSFQTLSNDSSGSTSYTGDNTVLISSEHST* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01041 697 Pfam Wall-associated receptor kinase galacturonan-binding 27 90 IPR025287 GO:0030247
Phac1g01041 697 SUPERFAMILY Protein kinase-like (PK-like) 357 645 IPR011009 -
Phac1g01041 697 Gene3D Phosphorylase Kinase; domain 1 348 447 - -
Phac1g01041 697 Pfam Protein kinase domain 376 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01041 697 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Phac1g01041 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Phac1g01041 697 FunFam serine/threonine-protein kinase PBS1-like 341 447 - -
Phac1g01041 697 PANTHER RUST RESISTANCE KINASE LR10-RELATED 345 666 IPR045874 GO:0004672
Phac1g01041 697 SMART serkin_6 373 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01041 697 FunFam PR5-like receptor kinase 448 656 - -
Phac1g01041 697 CDD STKc_IRAK 379 646 - -
Phac1g01041 697 Gene3D Transferase(Phosphotransferase) domain 1 448 657 - -
Phac1g01041 697 ProSiteProfiles Protein kinase domain profile. 373 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01041 Phac-Chr1 9811405 9818068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01041 28 681 Receptor kinase-like Gene Family AT1G66910 33.976 1.27e-109 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g01041 Pkinase 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01041 - - pvu:PHAVU_001G075800g 1113.98