Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01038 ATGAAAAACGGTGTGCGTGAAGAGAGCGCGTTATTATTGATGCTGGTGTTTCTACTTGAGCAAATTGGTGCTACAAAACAGTATGATCATGCGTGTCCCCCTTCTTCGTGTGGCAAAGTCACCAACATAACGCATCCATTCCGATTAAAAGGCGACCCAGATCACTGCGGCGACAACAGGTATGAGCTCACCTGTGAAAATAATGTTGCCATTTTATCTTTGTACTCCGGAAAATATCATGTTCAGGCAATCAACTACAACAATTTCACAATTCGACTGGTGGATCCCGGCGTTCAACAATTAAATTGCTCCTCCATTCCTCGCTATTTCTTGTCTCGATCCAATTTCAGCGATTCCTATGATTACAGCAACATAGATATGGAAGCATACCAAACTAGTCAACAACGATTATCTGATCAACCCGGCTATTTTAATCATAGGAAGGTGAACGTGATTGGTTCAGAGCCGGTTTCCGAACATGTGGTTTTCATGAATTGTAGGCATCCAGTGAGTGGCAATGGTAAGTATGTAGATACTGCTCCCTGCGTGAATTGGCATTCCAAAGGTTATACATATGCTATCGCTGGTGACTTAATCTCAGAGGACTTAGAGGTTGGTTGTGATGTAAAGCTGGTCACTCCCACATCTTGGTGGGGTTTGAACACAACTCAACATTCCTACACTGAGATGTACAAGGCACTAGTGTATGGGTTTGAGATTTCGTGGATGATTCGCGCCTGCGAGGACATTTGTGGAAAGTCAGTGGCTCGCTACTGCAAGTGGAACCTTTCCGGGAAGGTCGATTGCTCGCTCAACTGCCACAGTTTCCTTGGAATTTTGCATATATGCGATGGTAGTGGGATATGGTACCAGCTTCTACTATACGCAAGAGATACTCTTTATGCTGTCTGGATAGGTCTGGTTCAAACAATAAAAGGACAAAATGAAGGATTTGATGATGTCGGCAACTATAAATTAGGATTAATTATAGGACGCTACGTTTTACCATCCTTCTGGGCAGGAAAATTTTTGTTTGGGATGACTTTATTTATTGCAGTGTTGATATACAAATGGAAAAGTCGACATTTGTCTATGTACGAAAGTATTGAAAATTACTTGCAACATGCCAATTTGATGCCTATTAGATATTCATATAAGGAAATCAAGAAAATGACAGAAGGTTTCAAAGACAAGTTGGGTGAAGGAGGATATGGATCTGTGTTTAAGGGAAAGTTGTCTAGTGGACCTCTTGTGGCAATAAAAATATTAGGTAAATCAACACGAGATGGACAAGATTTTATTAGTGAAGTTGCAACTATTGGAAGAATACATCATCAAAATATAGTCAAATTAGTTGGATTTTGTGTTGAAGGATCAAAACGTGCACTTGTGTACGAATTCATGTCAAATGGATCTCTTGATAAAATTATTTTTTCCAAAGATGGAAATATAGATTTAAGCTATGGTGAAATATATAATATTTCAATTGGAGTAGCTCGGGGGATTGCTTATCTTCACCATGGGTGTGAGATGCAAATTTTGCATTTTGATATCAAGCCCCACAACATCCTACTAGATGGAAAACTCACCCCAAAGGTATCTGATTTTGGATTGGCAAAGTTATATCCAATAGATAACAACATTGCCACAATGACAGGAGCAAGAGGAACAATTGGGTATATGGCTCCAGAATTATTTTATAAAAATATTGGAAGAATATCTCACAAGGCTGATGTTTATAGCTTTGGAATGCTTCTATTGGAGATGGCAAACAAAGGAAAAAACCTAAATCCCCATGCAGAGCATTCAAGTCAACTATACTTTCCCTTTTGGATTCATAAGCATATAGAAAAAGAAAAACATATAGAAATTGAAGACGCCAACGAGAAAGAAAAGGAAGAAGTAAAAAAAATGATTATAATTGCACTTTGGTGTATACAGTTGAATCCAAATGATCGTCCCACGATGAATGAAGTAGTTGAAATGATTGAAGGAGACATTGAAAACCTGAAAATACCTCCAAAGCCTACTTTATATCCAGATGAAACAATGTCAAGTGACCTAAGCTTCACTAGTTCTTCCAATTCTTCCATTTTATCCATATATGATAAGATACAGACAGTCACTAGCAGTGGTAGTGAAATATGA 2148 0.3845 MKNGVREESALLLMLVFLLEQIGATKQYDHACPPSSCGKVTNITHPFRLKGDPDHCGDNRYELTCENNVAILSLYSGKYHVQAINYNNFTIRLVDPGVQQLNCSSIPRYFLSRSNFSDSYDYSNIDMEAYQTSQQRLSDQPGYFNHRKVNVIGSEPVSEHVVFMNCRHPVSGNGKYVDTAPCVNWHSKGYTYAIAGDLISEDLEVGCDVKLVTPTSWWGLNTTQHSYTEMYKALVYGFEISWMIRACEDICGKSVARYCKWNLSGKVDCSLNCHSFLGILHICDGSGIWYQLLLYARDTLYAVWIGLVQTIKGQNEGFDDVGNYKLGLIIGRYVLPSFWAGKFLFGMTLFIAVLIYKWKSRHLSMYESIENYLQHANLMPIRYSYKEIKKMTEGFKDKLGEGGYGSVFKGKLSSGPLVAIKILGKSTRDGQDFISEVATIGRIHHQNIVKLVGFCVEGSKRALVYEFMSNGSLDKIIFSKDGNIDLSYGEIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDGKLTPKVSDFGLAKLYPIDNNIATMTGARGTIGYMAPELFYKNIGRISHKADVYSFGMLLLEMANKGKNLNPHAEHSSQLYFPFWIHKHIEKEKHIEIEDANEKEKEEVKKMIIIALWCIQLNPNDRPTMNEVVEMIEGDIENLKIPPKPTLYPDETMSSDLSFTSSSNSSILSIYDKIQTVTSSGSEI* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01038 715 Gene3D Transferase(Phosphotransferase) domain 1 468 672 - -
Phac1g01038 715 SUPERFAMILY Protein kinase-like (PK-like) 378 663 IPR011009 -
Phac1g01038 715 FunFam PR5-like receptor kinase 468 675 - -
Phac1g01038 715 PANTHER RUST RESISTANCE KINASE LR10-RELATED 366 685 IPR045874 GO:0004672
Phac1g01038 715 Pfam Protein kinase domain 396 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01038 715 Gene3D Phosphorylase Kinase; domain 1 367 467 - -
Phac1g01038 715 ProSiteProfiles Protein kinase domain profile. 393 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01038 715 SMART serkin_6 393 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01038 715 FunFam serine/threonine-protein kinase PBS1-like 362 467 - -
Phac1g01038 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Phac1g01038 715 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Phac1g01038 715 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01038 Phac-Chr1 9773297 9782488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01038 9 702 Receptor kinase-like Gene Family AT5G38260 33.097 1.54e-106 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g01038 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01038 - - gmx:100305367 879.396