Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01030 ATGGGGAGAAAAGGAAGCAGCTGGTTCTCGTCCGTGAAGAAAGTTTTCAAGTCTTCTTCTAAAGACTTGCCAGAGCCTGAGAAGAAGAAAGACAGCACACAGAAATTACAGCATGAAGTGGCAGAGGTGGTGTCTTTTGAGCATTTTCCAGTAGAGAGTTCTCCGGATAATAATCCGACAAATGAAGAGAGTGGCACTTCAACTCCGGTTACAGAAGATAGAACCCACGCCATTGCCGTTGCAGCAGCTACTGCCGCAGCCGCTGAAGCTGCCGTGGCGGCTGCTCAAGCAGCTGCAAGAGTGGTGAGATTGGCAGGTTATGGACGCCACTCCAAGGAAGAAAGAGCAGCAGTACTCATTCAATCATACTACAGAGGCTATCTAGCTCGGCGTGCACTGCGAGCATTGAAGGGATTGGTGAGGCTGCAAGCACTGGTGAGGGGACACAATGTGAGAAAGCAAGCCCAAATGACTATGCGATGCATGCAAGCACTGGTGAGGGTGCAGGCCCGAGTAAGGGCTCGCCGACTCCAACTGAGTCACGTCAATGAGGAAAGACAACAATATCAGAAGATCGAAGAGCCCAAGCCCAAGCCCATGCCCATGAGCCCCATGAGAAGGACACACATCAATAATGATTGGGACAATAGGCGTCAAAGTAGCTACAAAATTAAGGAAAACGATTTGAGGAAACATGAAGCTACAATGAAGAGGGAGAGAGCTCTCGCTTACGCTTTCAACTACCAACAGCAACAGCAACAGCAGCAAAATCAATATTTGTTGGGTGAATGGAAGGGTAAGGATGAAATAGGAATAAAGGAAAAAGCGCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACAACCAGACAATGTGAGGAACATGGGGCCACGTGAAACCTCTTACATGACTCATGCTTCTTCAACATCGACCACCACAGATAACATGTCTGAGAAGACCGTGGAAATGGATATGATTGCAACTCCAGGCCCAGCCAATGTCAGAAGCATAAGCCCCATAAACCCAGACTTTATTGATTCAAGCCCACTCTCCAATAGGCAGAATCATTATATACCTCCCAGCCCAAATAGACGTTATATGGCCCCAACTCAGTCTGCAAAGGCTAAGGTTCGGGCTCAAGGCCCATCGAAGCCTCGGGCTTCAGCTGGGCCTCAGTGGAACTCCTCAATGAAGGGAGGCTCAACCTGCGACTCGTCTAGTTCAGGTGGAGGAATCACCGCTTACCAAATTCCAAGAAGTCCAGGCCCAAAAATTAATGGCATTCGCTCACAGTCCAGAAGGGTTGTGGGTAGCAGTCCAGATTACATTGAGGATTGGGCCCTTCCTCTTGGAACCCATGGTTGGGCTTAG 1377 0.4916 MGRKGSSWFSSVKKVFKSSSKDLPEPEKKKDSTQKLQHEVAEVVSFEHFPVESSPDNNPTNEESGTSTPVTEDRTHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHSKEERAAVLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHVNEERQQYQKIEEPKPKPMPMSPMRRTHINNDWDNRRQSSYKIKENDLRKHEATMKRERALAYAFNYQQQQQQQQNQYLLGEWKGKDEIGIKEKAQWGWNWLERWMSSQPDNVRNMGPRETSYMTHASSTSTTTDNMSEKTVEMDMIATPGPANVRSISPINPDFIDSSPLSNRQNHYIPPSPNRRYMAPTQSAKAKVRAQGPSKPRASAGPQWNSSMKGGSTCDSSSSGGGITAYQIPRSPGPKINGIRSQSRRVVGSSPDYIEDWALPLGTHGWA* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01030 458 MobiDBLite consensus disorder prediction 185 212 - -
Phac1g01030 458 Gene3D - 110 162 - -
Phac1g01030 458 MobiDBLite consensus disorder prediction 51 71 - -
Phac1g01030 458 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Phac1g01030 458 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Phac1g01030 458 MobiDBLite consensus disorder prediction 1 71 - -
Phac1g01030 458 MobiDBLite consensus disorder prediction 18 37 - -
Phac1g01030 458 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Phac1g01030 458 MobiDBLite consensus disorder prediction 389 416 - -
Phac1g01030 458 MobiDBLite consensus disorder prediction 380 433 - -
Phac1g01030 458 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Phac1g01030 458 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Phac1g01030 458 SMART iq_5 112 134 IPR000048 GO:0005515
Phac1g01030 458 SMART iq_5 135 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01030 Phac-Chr1 9745298 9751967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01030 1 426 IQD Protein Family AT3G49260 49.892 3.07e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01030 - - gmx:100798026 628.632