Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01023 ATGTGTAGTTCAGCTGAATATAATGACCTCATACAATCTTCTTCTGCAATCTCTGAATATGATTTGTTAATTGAGGGAGATCTGTTCAAAGCACCTGAACCTATTATTGAAGAACCAGAAATAGACCTCGATCCTGTGCAAGCAGCCATCTCAATGATATCTTGCGGGGAGGATGTCCCCTCACAGGGTCTAAAATCATCAGATATTAATTTACTTCAAAACGAACAGCTTCTGAGTGAGGTATTCTACGAGTGCAAAAAAGATCTCTTAGAAAAGACAGTGATAGAGTCACCACTGGCGGATATTATGGAAATCAAGGTTCCACCACTGAACATTGAGGATAATTCAATTCAAGTAAACGAACCACTTCCTCACATGACTCTACCAAAGAGTATCAGTTCAGAAAGTCTGAGTTCAATGGACTGGATGCATGGAGCTGCATTGAAGCCCAGTTTTCTGGATTTCCCGGGATTAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGCGAAGGAGATATAAAGACTCTTAGTACTGGGAACACGAGCTTTGGCCAATCTCCCCAGGAGAAGCCTTTTCTTCTCGGCAACTGTACTAGTGAGGAACGTCAAGAAAAGCTCTCCAGGTATAGAAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATTAAGTATGCTTGCCGGAAAGCACTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACAGAAGAGTTAGATTTCAAGAGGTAA 762 0.4121 MCSSAEYNDLIQSSSAISEYDLLIEGDLFKAPEPIIEEPEIDLDPVQAAISMISCGEDVPSQGLKSSDINLLQNEQLLSEVFYECKKDLLEKTVIESPLADIMEIKVPPLNIEDNSIQVNEPLPHMTLPKSISSESLSSMDWMHGAALKPSFLDFPGLDFNAVYGMRRAFSEGDIKTLSTGNTSFGQSPQEKPFLLGNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDFKR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01023 253 ProSiteProfiles CCT domain profile. 204 246 IPR010402 GO:0005515
Phac1g01023 253 Pfam CCT motif 204 246 IPR010402 GO:0005515
Phac1g01023 253 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 125 246 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01023 Phac-Chr1 9660476 9664535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01023 200 250 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 6.19e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac1g01023 CCT 1.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01023 - - aprc:113853022 398.667