Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00971 ATGACCGCACCACAACTTGACTTTCCGCCGGGATTCAGATTCCACCCCACAGACGAAGAACTCGTCGTTCATTATCTCTGCCGCAAATGCGTCAACCAACAAATCGCCGTTCCCATAATCGCCGAAATCGACCTCTACAAATACGACCCTTGGAATCTCCCAGGAATGGCGTTGTACGGAGAGAAAGAGTGGTATTTCTTCACGCCGAGGGAGCGGAAGTACCCGAACGGTTCGAGGCCGAATCGGTCCGCGGGAACCGGGTACTGGAAAGCAACTGGAGCTGATAAACCGATTGGTAAACCGAAACCGGTTGGGATAAAAAAAGCGTTGGTGTTTTACGCTGGAAAAGCGCCCAAGGGAGAGAAAACAAACTGGATCATGCACGAGTATCGTCTCGCCGACGTGGATCGTTCCGTTCGCAGAAAAAACAGCTTGAGGCTGGATGACTGGGTGCTGTGTCGCATATACAACAAGAAAGGCGCGGTTCAGAAGCAACCACCGCTCAAAATTGAGTCCTTCGAATTGGAGGACAAGAAGCCGCCGATTGCGCAACCCTACGCGGAGGCCACAGAGGCGGACTGCATGTACTTCGAGGCGTCGGACTCGGTGCCGCGAATGCTGACCACGGACTCCAGCTGCTCGGAGCAGGTGGTGTCGCCGGAGCTGGCGACTGAGGTGCAGAGCGAGCCGAAGAGGAGAAACAGCGAGTTTACGTATAATTACGTGGATGCCACTCTGGCGTCGGAGTTCCATAGCGCGAATCAGATGTCGCCGCTGCAGGATATCTTCATGTACCTCTCCAAACCGATGTGA 813 0.5424 MTAPQLDFPPGFRFHPTDEELVVHYLCRKCVNQQIAVPIIAEIDLYKYDPWNLPGMALYGEKEWYFFTPRERKYPNGSRPNRSAGTGYWKATGADKPIGKPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRRKNSLRLDDWVLCRIYNKKGAVQKQPPLKIESFELEDKKPPIAQPYAEATEADCMYFEASDSVPRMLTTDSSCSEQVVSPELATEVQSEPKRRNSEFTYNYVDATLASEFHSANQMSPLQDIFMYLSKPM* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00971 270 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Phac1g00971 270 FunFam NAC transcription factor 17 162 - -
Phac1g00971 270 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Phac1g00971 270 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Phac1g00971 270 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Phac1g00971 270 PANTHER NAC TRANSCRIPTION FACTOR 56 8 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00971 Phac-Chr1 8836004 8837960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00971 6 269 NAC Transcription Factor Family AT1G01720 69.366 1.00e-141 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g00971 NAM 4.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00971 - - pvu:PHAVU_001G072200g 544.273