Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00970 ATGACCGCACCACAACTTGACTTTCCGCCGGGATTCAGATTCCACCCCACAGACGAAGAACTCGTCGTTCATTATCTCTGCCGCAAATGCGTCAACCAACAAATCGCCGTTCCCATAATCGCCGAAATCGACCTCTACAAATACGACCCTTGGAATCTCCCAGGAATGGCGTTGTACGGAGAGAAAGAGTGGTATTTCTTCACGCCGAGGGAGCGGAAGTACCCGAACGGTTCGAGGCCGAATCGGTCCGCGGGAACCGGGTACTGGAAAGCAACTGGAGCTGATAAACCGATTGGTAAACCGAAACCGGTTGGGATAAAAAAAGCGTTGGTGTTTTACGCTGGAAAAGCGCCCAAGGGAGAGAAAACAAACTGGATCATGCACGAGTATCGTCTCGCCGACGTGGATCGTTCCGTTCGCAGAAAAAACAGCTTGAGGGTGGGTATATATACTTATACACCCTCTTTCTCTCTCCATTATAAAGGCCATTTCCTACCAAAACTACTGTTTTGCCCTTTAGTAAATGCTACTGCTCCATTGGTTCACACATCAAGAAGTTTCGGATTACGATAA 573 0.4852 MTAPQLDFPPGFRFHPTDEELVVHYLCRKCVNQQIAVPIIAEIDLYKYDPWNLPGMALYGEKEWYFFTPRERKYPNGSRPNRSAGTGYWKATGADKPIGKPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRRKNSLRVGIYTYTPSFSLHYKGHFLPKLLFCPLVNATAPLVHTSRSFGLR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00970 190 PANTHER NAC TRANSCRIPTION FACTOR 56 8 135 - -
Phac1g00970 190 Gene3D NAC domain 17 151 IPR036093 GO:0003677|GO:0006355
Phac1g00970 190 ProSiteProfiles NAC domain profile. 8 152 IPR003441 GO:0003677|GO:0006355
Phac1g00970 190 FunFam NAC transcription factor 17 155 - -
Phac1g00970 190 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Phac1g00970 190 SUPERFAMILY NAC domain 3 134 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00970 Phac-Chr1 8836004 8837960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00970 6 147 NAC Transcription Factor Family AT1G01720 89.510 8.27e-94 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g00970 NAM 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00970 - - pvu:PHAVU_001G072200g 304.293