Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00959 ATGGGTCCAAAATCAGTGTTTGTTCTCTCCACCACAAACTCAATTAAGGATAAGCAAGTGATGCTAATGCTTCCTCATTTGCTGTTCCTCTTCACCATGTTGACACATGAAGCAGCATCTTCCACATGTCCCATGGATCTATCTTACGTTGGTTCCATTCCCTGGAACACTAAGATCTGCAAAGACCCTATTGACAAGGGTCACTGTTGCGACACACTAAGGAGTGTCTTTGCCATTGCCCTCGCTGAGCGCCTCAAAGATACTCACATATTTTACCTTCCCGATGCAAACACTTCCTCCACTTGCTTACATGACTTCACACTCAGGCTTTCAGCCTTGTCCATCCACCAAAACATGGTTCCTCTTTGCTTCCCTAACTCAACACGCTTTGTTTTCAACTCTTCGGCTTGTGCAGGTATCAGAACCATCCAAGATTGGATTAACAAGGTGGGCCCAGATACCCCTTTGAGCTCAACTTGCAATAGGGACCTCAAAGACAAAACTCGCTGCAGACTTTGCTCTGATGCTGCCTCCACACTCAATTCCAAGCTCTCAACTATTTACCCAGATGCTGACCGCACAAAGTGTTTTTACTACTTAGTGTTGTATGCTGCAGCTGTTATTAACCCGTATGGTACAACCGATTTAAGCACCACGAGTTGCATACTGGACCTGGAGCATAGTGTTGTAATACAAGGGTCAAGTCATAGAGAAAAAGTGTGGAAGCTGGGTTTTGCGTTGTTGGGTGTTGTTATTGGTGTTGTGCTTGCTTTTGTTATGATAGTTGCGTACAGGAAGTGGGATAAGAGAAGGAGGCAGAGTGTTTATCACAGGGAGATAGAGAACAAGGTCAGGGCATGTGTTTTGCCTAATGCTGGTGTAAAATGGTTTCACGTAGCGGAGCTTGAGCGTGCCACTGAGCGATTTTCAAGGACGAATGTGGTTGGTCAAGGTGGTCATGGAGTTGTGTATAAAGGTACTCTTTCTGATGGTGCTGTGGTTGCTGTTAAGGACATTTTTTATTTGGAGGGTAAAGGAGATGAAGAGTTCAGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGCTGTTGCATTTCAAGTGATGATTTGGAAGGTAAGAGGAGGTTTTTGGTTTATGATTTTATGCCTAATGGAAGTCTCAGTGACCAATTGTGTTCTGATGGTGCTAACAGGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCTCCAATTTATCATCGTGACATAAAGGCCACCAACATACTTTTGGACTCCAAAATGAATGCTAAATTGGCTGATTTTGGGTTGGCCAAGCAAGGTTGTGAGGATCAGTCTCATCTCACCACAAGGGTGGCTGGCACATATGGTTATGTAGCACCAGAGTATGCTCTGTATGGACAACTAACTGAGAAAAGTGATGTCTATAGTTTCGGTATTGTTATTCTTGAAATCATGAGTGGAAGGAAAGTGCTTGATACTTTGGATTCATCTGCTGGTTCAATTACGGATTGGGCATGGACAATGACAGAATCTGGAAAGATTGAGGAAGTTTTTGATGAGTCAATAAGAGAAGGGCAAGAAAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATATGTCAGTGGCGTTAAGGCCTACTATTGTTGAGGCCCTTAAGATGTTAGAAGGTGCCATTGACATTCCCCAATTACCTGACAGACCAGTGCCACTGGGTCATGCGTCCTTCCAATCTTCTTTGTTGCATGGTTTACACAGAAGTGGTTGA 1845 0.4347 MGPKSVFVLSTTNSIKDKQVMLMLPHLLFLFTMLTHEAASSTCPMDLSYVGSIPWNTKICKDPIDKGHCCDTLRSVFAIALAERLKDTHIFYLPDANTSSTCLHDFTLRLSALSIHQNMVPLCFPNSTRFVFNSSACAGIRTIQDWINKVGPDTPLSSTCNRDLKDKTRCRLCSDAASTLNSKLSTIYPDADRTKCFYYLVLYAAAVINPYGTTDLSTTSCILDLEHSVVIQGSSHREKVWKLGFALLGVVIGVVLAFVMIVAYRKWDKRRRQSVYHREIENKVRACVLPNAGVKWFHVAELERATERFSRTNVVGQGGHGVVYKGTLSDGAVVAVKDIFYLEGKGDEEFSYEVEIISKIKHRNLLALRGCCISSDDLEGKRRFLVYDFMPNGSLSDQLCSDGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFGLAKQGCEDQSHLTTRVAGTYGYVAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTLDSSAGSITDWAWTMTESGKIEEVFDESIREGQEKIMERFVHVGMLCAHMSVALRPTIVEALKMLEGAIDIPQLPDRPVPLGHASFQSSLLHGLHRSG* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00959 614 Gene3D Phosphorylase Kinase; domain 1 269 389 - -
Phac1g00959 614 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00959 614 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 150 597 - -
Phac1g00959 614 Pfam Protein kinase domain 311 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00959 614 CDD STKc_IRAK 324 583 - -
Phac1g00959 614 FunFam Receptor-like serine/threonine-protein kinase At4g25390 274 389 - -
Phac1g00959 614 SUPERFAMILY Protein kinase-like (PK-like) 291 582 IPR011009 -
Phac1g00959 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Phac1g00959 614 ProSiteProfiles Protein kinase domain profile. 309 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00959 614 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Phac1g00959 614 Gene3D Transferase(Phosphotransferase) domain 1 390 589 - -
Phac1g00959 614 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 390 589 - -
Phac1g00959 614 Pfam SPARK 38 191 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00959 Phac-Chr1 8659155 8661579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00959 37 603 Receptor kinase-like Gene Family AT1G11050 49.660 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phac1g00959 Pkinase 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00959 - - gmx:100800481 895.575