Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00958 ATGATCCTTACCTTCATCTTGCTCTTCACCATTCTCATAGCTGCTGCATCTTCTTCATGCCCCATGGATCTCACCTATGTTCAGACCATTCCCTGGAACACTTCAATCTGCAAAGACCCTATTGACAAAAGTCCCTGCTGCCTAACACTCTCCAGCATCTTCGGGATAGGCCTTGCTGAACATCTCAAACAAACATCCATATTTTACCTTCCTGATGTAAACACTTCCTCCACTTGCTTATCTGATTTCAAACACCACCTTGCAGCCATCTCAGTAAAACCAACCATAGTCCCTCTTTGTTTCCCTCGCCCAACCCAATTTGTCACTAACTCTTCAGCTTGTGCAGGGATTAGAACTCTACAAGATTGGAACCAAAAGGTGGGCATGGATAGCCCTGTGAAAACATCTTGCAAAGGGGACCTAAAGGACCAAAATCTCTGCAGAATTTGCTCAGACGTTGCTATAGAATTGAAGTCCAATCTGACACTTATTGACCCAAATGCTAATGCCGTCGAATGTTTTTACTACATAGTTTTATATGCTGCAGCTGTCGCTAATCCGTTTGGTACAACAGATCTAAGCACTACTGGATGCATATTTGGCCTGCCAGAACCATCTAATGCAGTAACAAGAGGGTCATCAAACAAAAGAAGGAAAGTGATCATGCTTGTTTTTACGTTATTGGGTGTTGTTATTAGTGTTGTGCTTGCTTTTGCTCTGATGGTCGTGTACAGGAAATGGGATAAGAGAAGGAAGGAAAATGTTCATCGCAGGGAAGTTGAAAACGAGGTTAGGGCTGGCGTTTTGCCTGGCACAGGTGCTAAATGGCTGCACATATCAGAGCTTGAACGTGCCACGAGTAAATTTTCAGAGAGTAATGTGATTGGGAAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGATGGCACTGTGGTTGGTGTTAAGGAAATTTTAGATTTGGAAACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGTTGTTGTGTTACAAGTGATAATTTGAAAGGTAAGAGGAGGTTTTTGGTTTATGAGTTTATGCATAATGGAAGCCTGAGTGACAGATTGTGTTGTGATGGTGCTAATAAGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCAATTTATCATCGTGACATAAAAGCCACCAACATACTTTTGGATTCCAAAATGCATGCTAAATTGGCAGATTTTGGGTTGGCCAAGCAGGGTAATGATGGTCAATCTCATCTCACTACAGGGGTTGCTGGTACATATGGTTATGTAGCACCAGAATATGCTTTATATGGGCAACTAAGTGAGAAAAGTGATGTGTACAGTTTCGGTATTGTGATTCTAGAAATCATGAGTGGAAGAAAAGTGCTTGATACTTTGAATTCAGCCACGGATTCATTTACAGATTGGGTATGGGCACTTGCAGAATCTGGAAAGATGGAGGAAATTTTAGAGGAATCAGTAAGAGAAGGGTCGGTAAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCATTTGGTAGTGGCGTTAAGACCTACTATTGTTGAGGCACTTAAGATGTTAGAAGGTGACATTGAGATTCCCAAATTACCTGACAGGCCAGTGCCACTAGGTCATGCGTCCTTTCAATCTTCTCTGTTGCATGGTTTGCAGAGAAGTGGTTGA 1785 0.4202 MILTFILLFTILIAAASSSCPMDLTYVQTIPWNTSICKDPIDKSPCCLTLSSIFGIGLAEHLKQTSIFYLPDVNTSSTCLSDFKHHLAAISVKPTIVPLCFPRPTQFVTNSSACAGIRTLQDWNQKVGMDSPVKTSCKGDLKDQNLCRICSDVAIELKSNLTLIDPNANAVECFYYIVLYAAAVANPFGTTDLSTTGCIFGLPEPSNAVTRGSSNKRRKVIMLVFTLLGVVISVVLAFALMVVYRKWDKRRKENVHRREVENEVRAGVLPGTGAKWLHISELERATSKFSESNVIGKGGDGVVYKGTLSDGTVVGVKEILDLETKGDEEFCYEVEIISKIKHRNLLALRGCCVTSDNLKGKRRFLVYEFMHNGSLSDRLCCDGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMHAKLADFGLAKQGNDGQSHLTTGVAGTYGYVAPEYALYGQLSEKSDVYSFGIVILEIMSGRKVLDTLNSATDSFTDWVWALAESGKMEEILEESVREGSVKIMERFVHVGMLCAHLVVALRPTIVEALKMLEGDIEIPKLPDRPVPLGHASFQSSLLHGLQRSG* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00958 594 ProSiteProfiles Protein kinase domain profile. 289 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00958 594 Gene3D Transferase(Phosphotransferase) domain 1 370 568 - -
Phac1g00958 594 FunFam Receptor-like serine/threonine-protein kinase At4g25390 254 369 - -
Phac1g00958 594 Gene3D Phosphorylase Kinase; domain 1 248 369 - -
Phac1g00958 594 SMART serkin_6 289 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00958 594 SUPERFAMILY Protein kinase-like (PK-like) 273 562 IPR011009 -
Phac1g00958 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Phac1g00958 594 Pfam SPARK 16 168 IPR043891 -
Phac1g00958 594 CDD STKc_IRAK 295 563 - -
Phac1g00958 594 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 190 577 - -
Phac1g00958 594 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 370 569 - -
Phac1g00958 594 Pfam Protein kinase domain 290 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00958 Phac-Chr1 8649990 8652041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00958 15 591 Receptor kinase-like Gene Family AT1G11050 47.934 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phac1g00958 Pkinase 8.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00958 - - vra:106763645 937.176