Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00956 ATGGTCACAAAATCAAATGCTTCAAGTTTGTGTCTGCACCTGAAAATGGATAAGCAAGTGGTTCTCCTTTCTCTCCTAATTTTCATCTTCACTGTTTCTATAGCTGGTGCTGCATCTACCACATGCCCCATGGATCTCAGCTATGTTGAGACCTTTCCATGGGATACTTCATCCTGCAGAGACCCTGTTGATAAGGAGCACTGTTGCCAAGCTCTGCTCAGTGTGATTGGCCTGGGGATGTCCCAACACCTCAAAAACACTTCCTTCTTTCAACTTCCTGATGAAAACACTTCCTCCCTTTGCTTATCCAATTTCCAGACCAAACTCTCAGCCTTGTCAATAAACTCCTCTTTGGTCCCTCATTGTTTTCCTAGAGCTTCCGAGTTTGTTACTAACCCTTCAACTTGTGCAGGAATTATAACTATCGATGATTGGAAGCAAAAAGTGGGCATGATTAGCCCTTTAGACACTTCTTGTAATGGGGACCTGAGTGATCAAACTCGTTGCAGCATTTGTACTGATGCTGGTCTCAAAGTGACTTCCCAACTCAATAGTTTGGACCCAAATGCCACAAAGTGCTTTTACTTCACAGTTTTGTACGCCTCAGCTATAGTTAACCAGTTTGGTCCAACACATTTGGGCACAGCTGGTTGCGTACTAGGCATGCCGCTGTCTGTAAAAGGTTCATCGAATAAAAAAGAAGTGCTGAAAATTGTTTTTGGGTTGGTGGGTGCTGTTACTGGTGTTGTGTTGGGGTTTGTGTTGATTGTGATATACAGGAAGTGGGATAAGAGAAGGAAGGAAGATAGGTATCACAGGTCGGTTGAAAACGGTGTGAGGAACAGTGTTTTGCCTAATACCGGTGCCAAATGGTTTCACATATCGGAGCTTGAGCGAGCCACTAATAAATTTTCTCAGAGGAATATGCTTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGACGGCACTGTGGTTGCGGTGAAGGAAATTTTTGATTTGGAGACGAAAGGGGATGAGGATTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTTGCTCTTCGGGGTTGTTGCATTTCTAGTGATAGTTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGCCTAATGGAAGCCTGAGTTACCAATTGTCAGTTGCTGGGGCTAATAGGCTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTATGAGATCAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACATACTTTTGGATTCAAAAATGAAAGCCAAAGTTTCAGATTTCGGGTTGGCCAAGCAAGGGAATGATGGCCAGTCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCTCTTTATGGGCAACTAACAGAGAAGAGTGATGTGTACAGTTTTGGCATCGTGATTCTTGAGATGATGAGTGGAAGAAAAGTGCTTGATACCATGAATTCATCGGTTGTCTTAATCACGGATTGGGCATGGACACTGGCAAAATCAGGGAACATAGAGGACATTTTTGAGCAGTCAATAAGAGAAGAGGGGCCAGAGAAGATCATGGAAAGGTTTGTTCTTGTGGGAATACTGTGTGCTCATGCAATGGTGGCTTTAAGGCCTACTATTGCTGAGGCCCTTAAGATGTTAGAGGGTGACATTGACATACCCCAATTACCTGACAGACCAGTGCCACTGGGCCATGAGACCTTCCAATCTTCTTTGTTGCATGGTTTGCAAAGTAGTGGAAGATCATCCGCACACTTTTCATCATATCTTGCATCTTATTCAACAAGTACTAGAACAACATAG 1893 0.4348 MVTKSNASSLCLHLKMDKQVVLLSLLIFIFTVSIAGAASTTCPMDLSYVETFPWDTSSCRDPVDKEHCCQALLSVIGLGMSQHLKNTSFFQLPDENTSSLCLSNFQTKLSALSINSSLVPHCFPRASEFVTNPSTCAGIITIDDWKQKVGMISPLDTSCNGDLSDQTRCSICTDAGLKVTSQLNSLDPNATKCFYFTVLYASAIVNQFGPTHLGTAGCVLGMPLSVKGSSNKKEVLKIVFGLVGAVTGVVLGFVLIVIYRKWDKRRKEDRYHRSVENGVRNSVLPNTGAKWFHISELERATNKFSQRNMLGQGGDGVVYKGTLSDGTVVAVKEIFDLETKGDEDFCYEVEIISKIKHRNLLALRGCCISSDSLKGKRRFLVYDFMPNGSLSYQLSVAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVSDFGLAKQGNDGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEMMSGRKVLDTMNSSVVLITDWAWTLAKSGNIEDIFEQSIREEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPQLPDRPVPLGHETFQSSLLHGLQSSGRSSAHFSSYLASYSTSTRTT* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00956 630 Gene3D Phosphorylase Kinase; domain 1 265 384 - -
Phac1g00956 630 Pfam Protein kinase domain 306 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00956 630 PANTHER OS01G0750732 PROTEIN 58 595 - -
Phac1g00956 630 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 385 585 - -
Phac1g00956 630 SMART serkin_6 304 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00956 630 ProSiteProfiles Protein kinase domain profile. 304 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00956 630 CDD STKc_IRAK 310 579 - -
Phac1g00956 630 Gene3D Transferase(Phosphotransferase) domain 1 385 583 - -
Phac1g00956 630 SUPERFAMILY Protein kinase-like (PK-like) 289 593 IPR011009 -
Phac1g00956 630 Pfam SPARK 38 193 IPR043891 -
Phac1g00956 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Phac1g00956 630 FunFam Receptor-like serine/threonine-protein kinase At4g25390 269 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00956 Phac-Chr1 8627302 8629770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00956 31 607 Receptor kinase-like Gene Family AT1G11050 51.901 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Phac1g00956 Pkinase 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00956 - - gmx:100820563 1051.97