Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00955 ATGAGAAACCCTTCATCAACACCAACAACTAAGAACAAGAAGAGTGGTGGTAACAGTACTGCAACCAGCTGCAGCAACAACAGCAACAACAACAATGGTAGCAGCAGCAATAACAATGGTAGCAGCAACAACACTCCATGCTGCACCAAGGTTGGGTTGAAGAGAGGACCATGGACACCAGAAGAAGATGAGGTGTTAGCCAATTACATTAAGAGAGAAGGAGAAGGGCGGTGGAGAACTCTCCCCAAGCGAGCTGGCCTTCTCCGCTGCGGCAAAAGCTGCCGTCTCCGATGGATGAACTACCTCCGCCCCTCCGTCAAACGCGGCCACATCGCCCCTGACGAGGAAGATCTCATCCTCCGCCTCCACCGCCTCCTTGGCAACCGGTGGTCTTTGATTGCTGGGAGGATTCCTGGAAGAACAGATAATGAAATAAAGAACTATTGGAATACCCATCTTAGTAAAAAACTCATTAGCCAAGGGATTGATCCCAGAACTCACAAGCCTCTCAACCCACCATCCATTAATATTCCTTCTTCTTCTACTACTACTACTTTCACTGTTCCTCCACCCTCTATGCCTCCTCCAATGATCATCGCCACCCACAACCCTTGTCATGATCTCACTGCTGTTGACCAAGGAATTCATGCGATTCACCATTTGGGTCAACATCACCAACCTCCGCTTTCAAACCCCTTTGATAACAACAACATTAACAATCAAGTGGCTGCTGTAACAGATGATGTTTCTGCAATGGGGTTCATGGACAGTGAGGATTGCAACTATGATATCAACATCAATTATTACTCAGATGATGCCTTTTCTTCCTTTCTCAACTCCTTGATCAACGATGATGCTTTTGCGTCGCAACAGCACCACGTGCAAACAGAGCTCCCCAGTGAGCGTTGCATTCCACTGCCATGTGATGATCGTGTGGATGATCCTCTGGTTTCAATTACCACTGCTTCTACATCGCAGGGTTATGATGATGACCTTGGGGTTCTGTGGGAATCGCCTCTCGTGCCTTCTACTACTTTCACCCATCACGTTAACGACCCCATCATCAAGATGGCTCATGATCACCATCACCTCCATCAATAG 1101 0.4777 MRNPSSTPTTKNKKSGGNSTATSCSNNSNNNNGSSSNNNGSSNNTPCCTKVGLKRGPWTPEEDEVLANYIKREGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPPSINIPSSSTTTTFTVPPPSMPPPMIIATHNPCHDLTAVDQGIHAIHHLGQHHQPPLSNPFDNNNINNQVAAVTDDVSAMGFMDSEDCNYDININYYSDDAFSSFLNSLINDDAFASQQHHVQTELPSERCIPLPCDDRVDDPLVSITTASTSQGYDDDLGVLWESPLVPSTTFTHHVNDPIIKMAHDHHHLHQ* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00955 366 ProSiteProfiles Myb-like domain profile. 103 153 IPR001005 -
Phac1g00955 366 SMART sant 107 155 IPR001005 -
Phac1g00955 366 SMART sant 54 104 IPR001005 -
Phac1g00955 366 FunFam Myb transcription factor 52 108 - -
Phac1g00955 366 CDD SANT 113 153 IPR001005 -
Phac1g00955 366 ProSiteProfiles Myb-like domain profile. 50 102 IPR001005 -
Phac1g00955 366 MobiDBLite consensus disorder prediction 1 44 - -
Phac1g00955 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 157 IPR017930 -
Phac1g00955 366 SUPERFAMILY Homeodomain-like 52 149 IPR009057 -
Phac1g00955 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 102 IPR017930 -
Phac1g00955 366 Gene3D - 52 108 - -
Phac1g00955 366 MobiDBLite consensus disorder prediction 172 186 - -
Phac1g00955 366 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 45 178 - -
Phac1g00955 366 Gene3D - 112 173 - -
Phac1g00955 366 FunFam transcription repressor MYB5-like 112 178 - -
Phac1g00955 366 Pfam Myb-like DNA-binding domain 113 153 IPR001005 -
Phac1g00955 366 Pfam Myb-like DNA-binding domain 55 102 IPR001005 -
Phac1g00955 366 MobiDBLite consensus disorder prediction 164 186 - -
Phac1g00955 366 CDD SANT 57 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00955 Phac-Chr1 8610626 8612640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00955 41 284 MYB Transcription Factor Family AT3G13540 55.328 9.71e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g00955 Myb_DNA-binding 7.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00955 K09422 - gmx:100797847 494.582