Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00939 ATGGCAAGTGTGTTGCTCCTCCAACGTGATTCTGCATTGATGATGCTACTGCTAATGCTTCTTCTTATCAGATCTGGCAGCAGCGCTCGTAACGAGTGCGATGAGGAATTCTCTTGTGGACCGAACGAACCCCTTATTAGATTTCCCTTCCAACTCCTCAAGGAGATGGACGAGCCATGCGGTTATCCCCGTATTTGTCTTTCTTGCACTGAAAAAAATGAGACCATGCTTGCGCTTCCTACGATGAAACTCCTAGTCACTTACATAGACTACGAAAGTCGGGGAATTAACTTATATAAACCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACCATAAACTTTTTTCGAAGTTACCAATTTGAATCACCATATGGACCACACAATAACTTGAGCTTCTTCAACTGCACTTCAGCTGGGCTCAGAAACTACTACGACGATGGCTCAGATTCAACACAAGACATGGTCTCCTGTCCCATTTACATTTCTAATTCTTTTGATAGTGTCCTCCGATTGGGTCTAACATCCTGTACCAAGATGTTCGACCTCACTGCGCCAATCTCATCTTTAGACTCGGGTTTCTTGTATTTGAGTTGGTTCAAACCAAATTGTACTGAGTGCAAAGGAAAAGGCAAGAGATGTACATGGAAGACCAACAACACCACAGGAGACATGGATTGTTTTGAATGCAAACCGAAGAGAATTCACGTTCCTAAATCTTTTATTTTTGCTTCTACAGGTTCGATCCTTTTGGGGCTGGTGGTCATTGCTGTCTTCAAGAGCATCCTCTATTTTAGGAAAAAGCAAGAAGACCAAGCAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCAGCAAGATTCACCTATGCTGACCTGAAAAGAATCACCAATGGCTTCAAGGAAAACCTAGGAGAAGGAGCTCATGGGGCTGTGTTCAGAGGAAAGCTTTCGAGTGAGATTCCGGTGGCAGTGAAGATCCTCAACAGTACGGAGGGAGAGGGGAATGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGGTTCTGTGCAGATGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAAAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTTGGATGGGAGAAGCTTCAACACGTTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCATCAAGGTTGCAATCGTCCCATTATTCACTTTGACATAAATCCTCACAACGTGTTACTTGATCACAACTTCACTCCAAAAATCACTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGAGGAACTTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCCGATATTTACAGTTATGGAATGCTGTTGTTAGAAATGGTTGGTGGGAGAAAGAATGTGGACATGTCTTCTCCACAAAATTTCCATGTTCTATACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGGAGCCAGTGAATCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTGAAGAGGCAAACCAGATTGTTGTGCCTCCTAATCCATTTCAATCAACAACTTCCACTACAGTTAAGGGACTCAGTTCTACTAGACGACCTTTGCAGTTGGAAGTGATTCAAGAATGA 1830 0.429 MASVLLLQRDSALMMLLLMLLLIRSGSSARNECDEEFSCGPNEPLIRFPFQLLKEMDEPCGYPRICLSCTEKNETMLALPTMKLLVTYIDYESRGINLYKPENCFSNKFNQTINFFRSYQFESPYGPHNNLSFFNCTSAGLRNYYDDGSDSTQDMVSCPIYISNSFDSVLRLGLTSCTKMFDLTAPISSLDSGFLYLSWFKPNCTECKGKGKRCTWKTNNTTGDMDCFECKPKRIHVPKSFIFASTGSILLGLVVIAVFKSILYFRKKQEDQARVDKFLEDYRAEKPARFTYADLKRITNGFKENLGEGAHGAVFRGKLSSEIPVAVKILNSTEGEGNEFINEVGIMGKIHHINVVRLLGFCADGLHRALVYNFFPNGSLQSFIFPPEDKDHFLGWEKLQHVALGIAKGIEYLHQGCNRPIIHFDINPHNVLLDHNFTPKITDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPQNFHVLYPDWIHNLVDGDVHIHVEDEGDVKIAKKLAIIGLWCIQWEPVNRPSIKSVIHMLETEEANQIVVPPNPFQSTTSTTVKGLSSTRRPLQLEVIQE* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00939 609 FunFam PR5-like receptor kinase 375 580 - -
Phac1g00939 609 SUPERFAMILY Protein kinase-like (PK-like) 284 570 IPR011009 -
Phac1g00939 609 PANTHER RUST RESISTANCE KINASE LR10-RELATED 272 587 IPR045874 GO:0004672
Phac1g00939 609 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Phac1g00939 609 Pfam Protein tyrosine and serine/threonine kinase 302 569 IPR001245 GO:0004672|GO:0006468
Phac1g00939 609 Pfam Wall-associated receptor kinase galacturonan-binding 33 98 IPR025287 GO:0030247
Phac1g00939 609 ProSiteProfiles Protein kinase domain profile. 300 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00939 609 Gene3D Phosphorylase Kinase; domain 1 273 374 - -
Phac1g00939 609 FunFam serine/threonine-protein kinase PBS1-like 267 374 - -
Phac1g00939 609 Gene3D Transferase(Phosphotransferase) domain 1 375 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00939 Phac-Chr1 8455680 8458232 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00939 1 597 Receptor kinase-like Gene Family AT5G38260 34.688 1.46e-97 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00939 PK_Tyr_Ser-Thr 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00939 - - gmx:102662104 902.508