Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00936 ATGTCTTGTGGGCCGAACCAACCCCCTATCAGATTTCCCTTCCAACTCATCAAGGAGATGGACGAGCCATGCGGTTATCCCCGTATTTGTCTTTCTTGCACTGAAAAATATGAGACCATGCTTGCGCTTCCTACTATGAAACTCCTAGTCACTTACATAAACTACCGATATCAGGAAATTGGCTTAACGGACCCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACCATCAATTTTATTCGAACTTACCAATTTAAATCATATGATGGACCACACAACTTGAGCTTCTTCAACTGCATTTCACCTGAGCATCCACACCTCAGAAACTACTACGACGATGGCTCAGATTCACAAGACATGGTCTCCTGTCCGATTTACATTTCTAATTCTTTTGAAAGTGTCCTCCAATTGGATCTAACATCCTGTACCAAGATGTTCGACCTCACTGCGCCATTCGCATCCATCCACTGGAATAACTTGATTTTGAGATGGTCCAAACCAAATTGTGCTGAGTGCAAAAGAAAAGGGAAGAGATGTACATGGAAGACCATCAACACCACCGGAGACATCGATTGTTTTGAATGCAAACTGAAGAGAATTCACGTTCCTAAATCTTTTATTTTTGCTTCTACAGGTTCGATCCTTTTGGGGCTGCTGGTCATTGCTGTCTTTATGAGCATCCTCTATTTTAGGAAAAAGCAAGAAGACCAAGCAAGAGTGGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGACCTGAAAAGAATCACCAATGGCTTCAAGGAAAAGCTAGGAGAAGGAGCTCATGGGGCTGTGTTCAAAGGAAAACTTTCGAGAGAAATTCCGGTGGCTGTGAAGATCCTCAACAATTCAGAGGGAGAGGGGATTGAGTTCATCAATGAAGTCGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCGTTTGCTTGGCTTCTGTGCAGATGGACCCCATCGTGCACTTGCCTACAATTTCTTTCCAAACGATTCCTTACAAAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTCGGATGGGAGAAGCTTCAACACGTTGCAGTTGGTATAGCTAAAGGGATTGAATATCTTCATCAAGGTTGCAATCATCCCCTTATTCACTTTGACATAAATCCTCACAACGTCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCATGACGGCTGCTAGAGGAACTTTTGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCCGATATTTACAGTTATGGAATGCTGTTGTTAGAAATAGTTGGTGCGAGAAAGAATGTGGACATGTCTTCTCCACAAAATTTCCATGTTCTATACCCGGATTGGATCCATAACCTGATTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTCGTGCATTCAGTGGGAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTAAAGAGGAAAACCAGTTTGTTGTGCCTCCTAATCCATTTCACTCAACAACTTCCACTACAGCTAAGGGACTCAGTTCCACAAGACGACCTTTGCAGTTGGAAGTAATTCAGGAATGA 1677 0.4264 MSCGPNQPPIRFPFQLIKEMDEPCGYPRICLSCTEKYETMLALPTMKLLVTYINYRYQEIGLTDPENCFSNKFNQTINFIRTYQFKSYDGPHNLSFFNCISPEHPHLRNYYDDGSDSQDMVSCPIYISNSFESVLQLDLTSCTKMFDLTAPFASIHWNNLILRWSKPNCAECKRKGKRCTWKTINTTGDIDCFECKLKRIHVPKSFIFASTGSILLGLLVIAVFMSILYFRKKQEDQARVDKFLEDYRAEKPARFTYADLKRITNGFKEKLGEGAHGAVFKGKLSREIPVAVKILNNSEGEGIEFINEVGIMGKIHHINVVRLLGFCADGPHRALAYNFFPNDSLQSFIFPPEDKDHFLGWEKLQHVAVGIAKGIEYLHQGCNHPLIHFDINPHNVQIVFQESQFGVMTAARGTFGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGARKNVDMSSPQNFHVLYPDWIHNLIDGDVHIHVEDEGDVKIAKKLAIIGLSCIQWEPVNRPSIKSVIHMLETKEENQFVVPPNPFHSTTSTTAKGLSSTRRPLQLEVIQE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00936 558 PANTHER RUST RESISTANCE KINASE LR10-RELATED 239 536 IPR045874 GO:0004672
Phac1g00936 558 Pfam Protein tyrosine and serine/threonine kinase 267 518 IPR001245 GO:0004672|GO:0006468
Phac1g00936 558 Pfam Wall-associated receptor kinase galacturonan-binding 2 64 IPR025287 GO:0030247
Phac1g00936 558 Gene3D Transferase(Phosphotransferase) domain 1 340 529 - -
Phac1g00936 558 SUPERFAMILY Protein kinase-like (PK-like) 249 521 IPR011009 -
Phac1g00936 558 Gene3D Phosphorylase Kinase; domain 1 238 339 - -
Phac1g00936 558 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Phac1g00936 558 FunFam serine/threonine-protein kinase PBS1-like 232 339 - -
Phac1g00936 558 MobiDBLite consensus disorder prediction 530 549 - -
Phac1g00936 558 ProSiteProfiles Protein kinase domain profile. 265 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00936 Phac-Chr1 8413821 8415820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00936 214 533 Receptor kinase-like Gene Family AT4G18250 37.572 1.48e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00936 PK_Tyr_Ser-Thr 4.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00936 - - gmx:100809236 811.216