Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00935 ATGCCTATTCGATACACATACAAGGAAATTAAGAAGATGGCCAGAGGTTTCAATGAAAAATTAGGTGAAGGAGGTTATGACACTGTATTTAAAGGAAAGTTGCGTAGTGGACCTTCTGTTGCTATAAAAGTGTTACGAAAATCAAAAGGTAATGGACAAGACTTTATCAATGAAGTTGCAACAATTGGAACAATACATCATCAAAATGTAGTGCAGTTAATTGGATATTGTGTTGAGGGTTCAAAACGTGCACTTGTTTATGAGTTCATGCCTAATGGATCTCTTGACAAATTTATATTTTTCAGAAAAGAAAATCTGCATTTAACCTATGATGCAATATATAATATAGCAATTGGAGTAGCACGTGGAATTTCATATCTACATTATGGTTGTGAGATGCAAATTTTGCATTTTGACATCAAACCCCACAACATCCTGCTTGATGAAAAATTCACCCCAAAAGTCTCTGACTTTGGATTGGCAAAACTATATCCAATAGACAAGAGTGTTGTGACTATGACAGCAGCAAGAGGGACAATTGGATACATGGCTCCAGAATTGTTTTATACAAATATTGGAAGAATATCAGATAAGTCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAGATAGCAAGCAAGAGAAAAAACTTAAATCCCCATGCAGAGCGTTCAAGCCAACTTTACTTTCCCTTTTGGATTTATGATCAACTTGACAAAGAGAAAGATATAGAAATGGAAGATGTCATAGAGGAAGAGAAGAAAATTGCAAAAAAAATGATGATAGTTTCACTCTGGTGCATACAATTAAAACCAAATGATCGTCCTTCCATTAATAAGGTAGTTGAAATGCTTGAAGGAGACATTGAGAACCTTAAAATACCTCCAAAACCTTCTCTGTATCCACATGACACATTGGAAAGAATTTGCTCTTACCAAACAACATTGTCTGAGTTTATTAGTTCTTCAAGCAATTCCATGAAAATTGCCACTAATCCTCCCCTAAATGAAAGTATTTGA 1020 0.3461 MPIRYTYKEIKKMARGFNEKLGEGGYDTVFKGKLRSGPSVAIKVLRKSKGNGQDFINEVATIGTIHHQNVVQLIGYCVEGSKRALVYEFMPNGSLDKFIFFRKENLHLTYDAIYNIAIGVARGISYLHYGCEMQILHFDIKPHNILLDEKFTPKVSDFGLAKLYPIDKSVVTMTAARGTIGYMAPELFYTNIGRISDKSDVYSFGMLLMEIASKRKNLNPHAERSSQLYFPFWIYDQLDKEKDIEMEDVIEEEKKIAKKMMIVSLWCIQLKPNDRPSINKVVEMLEGDIENLKIPPKPSLYPHDTLERICSYQTTLSEFISSSSNSMKIATNPPLNESI* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00935 339 SMART serkin_6 15 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00935 339 CDD STKc_IRAK 21 287 - -
Phac1g00935 339 SUPERFAMILY Protein kinase-like (PK-like) 4 286 IPR011009 -
Phac1g00935 339 FunFam serine/threonine-protein kinase PBS1-like 1 89 - -
Phac1g00935 339 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Phac1g00935 339 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 307 IPR045874 GO:0004672
Phac1g00935 339 FunFam PR5-like receptor kinase 90 297 - -
Phac1g00935 339 ProSiteProfiles Protein kinase domain profile. 15 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00935 339 Pfam Protein tyrosine and serine/threonine kinase 17 285 IPR001245 GO:0004672|GO:0006468
Phac1g00935 339 Gene3D Transferase(Phosphotransferase) domain 1 90 299 - -
Phac1g00935 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00935 Phac-Chr1 8406363 8407578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00935 4 313 Receptor kinase-like Gene Family AT5G38260 50.476 8.25e-109 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00935 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00935 - - gmx:100305367 558.525