Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00931 ATGGCAAGAGTGTTGCTCCTCCAACGTGATTCTGCATTGATGATGCTACTGCTAATGCTTCTTCTTATCAGAACTGGCAGCGCTCATAACGAGTGCGATGAGGAATTGTCTTGTGGGTCGAACCAACCCCCTATCAGATTTCCCTTCCAACTCATCAAGGAGATGGACGAGCCATGCCGTTATCCCCGTATTTGTCTTTCTTGCACTAAAAATAATGAGACCATGCTTGCGCTTCCTACTATGAAACTCCTAGTCATTGAGATAGACTACCGACTTCAGTACTTTGGCTTAACGGACCCCGAAAACTGCTTTTCCAACAAGTTTAACCAAACGATCAATTTTATTCGAACTTACCAATTTAAATCATATGATGGACCACACAATAACTTGAGCTTCTTCAACTGCACTTCACCTGAGCATCCACACCTCAGAAACTACTACGACGATGGCTCAGATTCACAAGACATGGTCTCCTGTCCGATTTACATTTCTAATTCTTTTGAAAGTGTCCTCCTATCGGATCTAACATCCTGTACCAAGATGTTCGACCTCACTGCGCCAGTCGCAGCCATCCACCCGAATGTTTTGATTTTGAGATGGTCCAAACCAAATTGTGCTGAGTGCAAAGGAAAACGCAAGAGATGTACATGGAAGACCAACAACACCACAGGAGACATCGATTGTTTTGAATGCAAACCGAAGAGAATTCACGTTCCTAAATCTTTTATTTTTGCTTCTACAGGTTCGATCCTTTTGGGGCTGCTGGTCATTGCTGTTTTTAAGAGCATCCTCTATTTTAGGAAAAAGCAAGAAGACCAAGCAAGAGTAGACAAGTTTTTAGAGGACTACAGGGCAGAAAAGCCAGCAAGATTCACCTACGCTGACCTGAAAAGAATCACCAATGGCTTCAAGGAAAACCTAGGGGAAGGAGCTCATGGAGCTGTGTTCAGAGGAAAACTTTCGAGTGAGATTTTGGTGGCTGTGAAGATCCTCAACAGTACAGAGGGAGAGGGGAATGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATCCATCACATCAACGTGGTGCATTTGCTTGGCTTCTGTGCAGATGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCAAACGGTTCCTTACAAAGCTTCATATTTCCACCAGAAGACAAGGACCATTTCCTCGGATGGGAGAAGCTTCAACACGTTGCTCTTGGTATAGCTAAAGGGATCGAGTATCTTCATCAAGGTTGCAATCAGCCCATTATTCACTTTGACATAAATCCTCACAACGTATTACTTGATCACAACTTCACTCCAAAAATCACAGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCCCAGTTTGGTGTCCATGACAGCTGCTAGAGGAACTTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAACGTGTCTTACAAGTCCGATATTTACAGTTATGGAATGCTGTTGTTAGAAATGGTTGGTGGGAGAAAGAATGTGGACATGTCTTCTCCACAAAATTTCCATGTTCTATACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGATGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGGAGCCAGTGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTGAAGAGGAAAACCAGTTGGTTGTGCCTCCTAATCCATTTCACTCAACAACTTCCACTACAGCTAAGGGACTCAGTTCCACAAGACGACCTTTGCAGTTGGAAGTGATTCAGGAATGA 1833 0.4315 MARVLLLQRDSALMMLLLMLLLIRTGSAHNECDEELSCGSNQPPIRFPFQLIKEMDEPCRYPRICLSCTKNNETMLALPTMKLLVIEIDYRLQYFGLTDPENCFSNKFNQTINFIRTYQFKSYDGPHNNLSFFNCTSPEHPHLRNYYDDGSDSQDMVSCPIYISNSFESVLLSDLTSCTKMFDLTAPVAAIHPNVLILRWSKPNCAECKGKRKRCTWKTNNTTGDIDCFECKPKRIHVPKSFIFASTGSILLGLLVIAVFKSILYFRKKQEDQARVDKFLEDYRAEKPARFTYADLKRITNGFKENLGEGAHGAVFRGKLSSEILVAVKILNSTEGEGNEFINEVGIMGKIHHINVVHLLGFCADGLHRALVYNFFPNGSLQSFIFPPEDKDHFLGWEKLQHVALGIAKGIEYLHQGCNQPIIHFDINPHNVLLDHNFTPKITDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSPQNFHVLYPDWIHNLVDGDVHIHVEDEGDVKIAKKLAIIGLWCIQWEPVNRPSIKSVIHMLETEEENQLVVPPNPFHSTTSTTAKGLSSTRRPLQLEVIQE* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00931 610 FunFam serine/threonine-protein kinase PBS1-like 268 375 - -
Phac1g00931 610 PANTHER RUST RESISTANCE KINASE LR10-RELATED 273 589 IPR045874 GO:0004672
Phac1g00931 610 Gene3D Phosphorylase Kinase; domain 1 274 375 - -
Phac1g00931 610 ProSiteProfiles Protein kinase domain profile. 301 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00931 610 Pfam Wall-associated receptor kinase galacturonan-binding 32 96 IPR025287 GO:0030247
Phac1g00931 610 Gene3D Transferase(Phosphotransferase) domain 1 376 581 - -
Phac1g00931 610 MobiDBLite consensus disorder prediction 582 601 - -
Phac1g00931 610 FunFam PR5-like receptor kinase 376 582 - -
Phac1g00931 610 Pfam Protein tyrosine and serine/threonine kinase 303 570 IPR001245 GO:0004672|GO:0006468
Phac1g00931 610 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Phac1g00931 610 SUPERFAMILY Protein kinase-like (PK-like) 285 571 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00931 Phac-Chr1 8351361 8394212 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00931 29 599 Receptor kinase-like Gene Family AT1G66910 32.437 1.51e-95 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00931 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00931 - - gmx:102662104 910.983