Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00921 ATGGATCAGCACCACTTCCTCCACCACCACCACTACCACCACCCTCAGGACCACCGCACAACCCGCTACACTTCCCTCAACCCTCAATCGCATCACCACCACCACCATAACAACCTTCCTCCGCCGCCGCCCGCTCCGCCACCGCCTCTCTCCTACCACCGCACCCTCCACACGCCTCCCGCGCCGCAACCCTACACCCCTTCTACACCCCAACACCAACAACAGCAGCAACAGCAACAACAATTCTCTTTCAACCATCACACAACTCTCCCACACCGCTCCCTCGAAGATGATTCACGCTCTCTCCCCTACGACCTCCTCCCTCGCCGCACCTCTGCCATCCCCTGGAACCCTAACCCTAGAACTGACGATTTCGACCGCGAATTTCACCACCACCACCACCGCCCTCCGCCACCACCGCCTCCCCCGATCGAAACCCTACGCTACGACCCCGGGCGCCGTGACCGCCTCGTGGTGGATCCCTATGAGCAGAATCCCAGGGAGGCACTCGCGTGGGGAGGCGGTGACTACCACGCGCCGAGCCAGGGCGACGTAGAGCCTTCTCCTTACGTGCGCGTATACAGTGTGGAATGTGATGCTGACGTGGCGGGCAGAGGGTCCCGGGTCGAGAGCAAGAGGTGGGTGATGAGTGATAGAGAGAGGGAGAGGGGAAGAGAGTTGCACGAGTCTTCTTCTAATTTGGTTAGCAAGGGTAGTAACAGTGATAAATATTATCATGGTTCTGACAATGTGGGTAGGTATAGTAGAGGGAATAGCAGAGAGTGTGGTCATGAATTCGCACGCACTCCTCCTAAGAAACAGGTGCAGAAGAAGAGCGCGCTTCTTAGGATTCAGACTGTTAAACCTAATCATAGGAATCGTGAGGTTGAGCAGTCACGGTACCCCGGTTATGGACCTGAAGGTAGCAATGGCTTTTTCAGGGGGAAGGAGCAATATTTGGCTCATGGGGTTAAGGGGGAAGAGAGAGAAGGGAGCCCTGTTGAGATTGATATCTCTTTTGAGTCCAATTCTCTGGTGGCCAAGGCTATTGTTGCGCCGCCTTCAAGTTCAGTGTCTGTTCCTGATTTGAATGTGACGCCGGTTTTGGATTCGGATTTGGGTTCTGGGGATAGGAATAAAAGGGTTTCGGGCTCTGATGGCTATTTTCCGGGTTTGCAGCAGCCGTTTAGAGTGTCTTCTGTTGTGGTTGTGGATTTAAATAGGTCGCCTAGTAAAGGGAATGATAGGTCTAGTTTGGGGAAGGAGGTTAATGTGCGGAAGAATGTTGAGGATGGTTCTTCTCGGTCTCGCACCAGGGAGGCTGATGATTCTCGTGGGAAAAATGTGGTGCCAAATTCGGTCAAAGTTGGCAATGTCTGTTCTGGTAAATCGACCATGACGGTTGTCAAGAAGAAGAAAATTGTCAAGAAAGTGGTGAAGAAAGCCACTGCAAACTCTAAGACATCTGTGTCAAATTCACTGCCGGCAAAAAGGCTTCCTGGAACTGTGAAAGTGGAGAGTGCTGCACTGAGTTCGTCAACTGCCTCTGTTCCTGACAAAATTGGAGCTAATTCAGATGAGAAAAGGAACATTGTTGATGAGGTGGCTGGGCCAGACTGTTTGCACTCTTTGCCAAAGGAAGAAAATGTATTGAAAGAAGATAAAGAGGGAGGTTTACTGCAGCTGAGTTTGGGGCCAGATTCCACATCGCAAGAGTGTAGTAGGAGTGACAAAGATTCTGATAGTAGGGAAGTATCCAGGTTTGAAGTTGAAAGAGATGGAAACATTCTAAAATTTCCATCTTGTGCATTTAGTAGTGAAGATAAGAAGAGTGATTCAGATTGTTTAGATGCAAATAATAATGTCCTTGATAATGGAAATATTATTTCTATGCATGATAATTCAAATACTTCTGATTGTTTAGATGCAAATAATTCTGTTCCAAATACTTACATGGTTACTGAATTCTTAAGTGGAAGCACTATTTCTGAAGTCAATCACATGGATTATGATAATAAGCAATTGTGTCAGAATGAAGTGTCTCTATCACTTGGGAAATATTCAAATGTACAGTCCCCACTGAATAACAATCTTGAAGATGTAGGGGATGAACTATTAAAAACCAGTGATACTTTTTCAAGTTCAAGAAAAACTAGGATTCAAGATGGTCTAGATTGCCTACAACATGCCAGTGCACTGAAGCACATTTCTGATGATGGATCATCTAATTTAGAAGATTGTATTAGTGTTCACTGCTCTGGTATCATGGATGATGCTGGAAAGCAATTGACCCATGGTGATGTCACCATACACCCTGAGAATTGTGAGACAGAAAAAGCATTTCCAAATTCTAATATTTTAGCTGGATCTGGTGAAGGGGACTCAAAGAAGATAAAAAAGAGAAGATCTAGAACACAATTAAATTTTTTGAGTTCAGAGATGGAGTCCTTATCTACAGATCATGTAAATCCTGTTAGCCTTGCAAATAATGTGGATGGAATCACAAGTCTGTTGTCGAAAGATCCATCTGCTTCTGAAGTTTTAGATCAATCTGTTGAAAACGATGTTGACTCAATAACTGGTCTGGATGGGGTTACTGCTTTACATGAGAAAGGGGGGGTTTTAGAGACTCAGTTTTATGCTGCAAATAACAGCAACGATGATGCAAGTGAGGTTTCACCATCTTCTAAAAGGAAAAAAGTGACAGCTAACCCAATTTTCACTCATTGTCAATCGGAAATCAGTGCTATGATTGTAGTTACCACAACGTCTAATGCTGAAGCTCCTATCAATTTCAATGATAACCAAGAACATCAGAAAGAAGTTGCTTTGTCAAGCATGGGTATGTGTATTCCGTCTTCTGCTCAGTCAATGCCTTATTCGGAGGATATTACTAAAATGTCTGTCAATATTTTGAGTGGAGGATCTTTTGACTTCATTGATGCAAATAGGGAAACCTCTTTTTCACCATGTGAGGACTTGGCATTTCAAAACGATCAGTTCTCACCATTGGAAGGTGAGTGCACAGAAAACATTACTCCAGTTGTGCTTGTGAGTGATACTCACACTGATGTTTTAGGTCTTGGAAATATAATGGGAGAAAAGACTGATTTACATGCCGTTAAGGAAAATTACCAATATAAAGACTTTGCGCAAAGGTCACCAAGAGCTGATATGGAACCTAATGATCTCAATGTGAAGAATGATTCGCTTGCTCAGCAGAACCTTATGTCCTGTCCAGCCAGTGGTGACGAAGTCACTACAAGTAATTCGAATGATGAATTGATTGTGGATGCACCTGGTGCATTATCAGATATCTTTTCTCAAGGGATGGCATCTGAAGTACCGGATAGAAGGGTTTTAGAATTGACAGCAATCAATGATGAAAATATCTGTGGGGTTGAAGAAAATACTTCATCAGTACAGGAGACGAAACAGAACAGTAGGTCAGATCATGCATTTGGACATAATATGATGATAAAGAAAACAATTTCAGAACCATCCCAAGTATCTTCCAAAGTTACAACTCAGGCTCTAAATTCATATCGTTTTGGGTTGAGTGGGACCAAAAATCAGTCAGGTAGGGTAATTCCCAAAACTTTTCCAGGTCATTCTCTTACCTTTTCAAGATCGGAGACAAAGACATCTGCCTCTTCAACTCATGTATCAAAGCCTCGAACTTGGCATCGTACAGGTAATAATCCCCCTATTTCTCTACCTAGAATCAATTCAGTAGGAACAATTCCTTCGAAAAGACCAATTCTTGAAAGGAAAGGGAACTTTCAAAATACCTCATATGTGCGTAAAGGAAACAGTCTTGTAAGGAAACCTACTGCAGTTTCTGCTCTACCTCAAATCTCCTCTGTTAATCAGTCATCTTCTTTGGGCTTTGATGACATATCAAAAAGCACTAAATCTGAAAGCAGGGCTGATTTTACAAATCAACCAATGTACCTGAGAGCAGGAGCAACATATTCTCAGCAGAGGCAGAGAACACCTCCACTACCAATTGACACCAAATCCGAGGAAAATACATCTTCCTCACTGGTAGAACCTCCATCTGGTGGTTCCTGTGAAAATGTATCAGATCCTACGTCATTTATAGAAATTAATAATAATGTACGGAACTCTTCTGAAGACACACTGAAGCATTATGAAATTCCTGAAAACCAACCTGTTCCATTGGACAATGGGGAGAGTCAAGTAGAAGCAAACAATGGCAATCCTCTTTCTTTGAATACGAAGAGAATAGTATATATAAAGCCCAAAACGAATCAATTGGTTGCAACATCAAATTCTTGTGATGTTTCTGTCCCTGCTGATGACAATGGTCAAACTGCCTTCTCTGATGGCTACTACAAGAGAAGAAAAAATCAATTGGTTAGGACTACATTTGAATGCCACAACAACCAGACTGCTGTAGTGCCTAATGGCAAGGCAAATTCTGATGGACAAGGAACTAGTAATGCTCTTTGCAATAGGAGGTTTAGTAAGAAGCGCTTAAATAAGGTTGGCAGGAGTTCATGCAAACGTTCAAGAGCCTCACTAGTGTGGACACTCTGTAGCAAAAGTTCTTCTGAAAATGATAGGAATTCACGTCATTATCAAAAGGTTTTGCCTCAATTGTTTCCATGGAAAAGAGCAACATTTGCTTCAAGTTTCAATAGCAGTTCCGTATCTGCAATCAGCAAAAAATTGCTTCAATTGAGAAAGAGGGATACTGTTTACACTAGGTCAAAACATGGGTTTTCACTTTGGAAATCCAGAGTTTTAGGTGTTGGCGGGTGTAGTTTAAAATGGTCCAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAAGCTACACTTGCTGTTGCCGCAGTAGAGAAGAAGAAGAGAGAACAGAAAAATGCGGTTTGCATCAGTTCTCAGTCAAAGAGAGAGCGTATATTTCGTATTGGCTCAGTTCGTTACAGAATGGATCCTTCCAGGAGGACACTTCAGAGGATTTCAGTCGATGAATCCCAGTCCTCGGCATCTACCAGTTCAGGTTTGGCTTCCAAAAGTGCTTACATTCCAAGGAGATTAGTGATTGGAAGTGATGAATACGTACGAATTGGAAATGGTAACCAGCTTATCAGAGACCCAAAAAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGAAAGCAGTATTGTCAGTTTTTTACCAGATTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCACGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTAACGCACCAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCTCAAACAGTAATTGTCCATATAGACATGTCAATGTGAACCCCAATGCATCTATTTGTGAAGGATTTCTCAGGGGTTATTGTGCTGATGGGAATGAGTGTCGGAAGAAGCACAGCTATGTGTGTCCTACTTTTGAAGCAACAGGTACCTGTACTGAAGGAGCCAAATGCAAACTTCATCATCCAAAAAAACAGAGGAAGGGAAAGAAAAGGAAGAGATCTGGAGATCAGAACAACACTAGAGGGCGCTATTTTGGTTCTATTCCTGCTGATGTTTCTGAATCTGGGTTGATGGTGGCTCCAAAGCGACATAAACAAAGTGAAATTGAAGAGGAACTGTCTGATTACATCAGCCTTGATGTTGTCAGTGAAGAAGTCGCAGACACTGATGATCTATCATTTGATCCAGCAGTGTTCTGCGAGAATGATTCCTTGGATGATTTTGATGAACTCATTAAACCAGTTCTTCTATTGAAAAGAAAGTTCACATCACAATCACCTAACTCCCATATCCTCGAAGCAAGTGCCGGAGACGTCGGTCGTTTGTTAATGAGGTAA 5961 0.429 MDQHHFLHHHHYHHPQDHRTTRYTSLNPQSHHHHHHNNLPPPPPAPPPPLSYHRTLHTPPAPQPYTPSTPQHQQQQQQQQQFSFNHHTTLPHRSLEDDSRSLPYDLLPRRTSAIPWNPNPRTDDFDREFHHHHHRPPPPPPPPIETLRYDPGRRDRLVVDPYEQNPREALAWGGGDYHAPSQGDVEPSPYVRVYSVECDADVAGRGSRVESKRWVMSDRERERGRELHESSSNLVSKGSNSDKYYHGSDNVGRYSRGNSRECGHEFARTPPKKQVQKKSALLRIQTVKPNHRNREVEQSRYPGYGPEGSNGFFRGKEQYLAHGVKGEEREGSPVEIDISFESNSLVAKAIVAPPSSSVSVPDLNVTPVLDSDLGSGDRNKRVSGSDGYFPGLQQPFRVSSVVVVDLNRSPSKGNDRSSLGKEVNVRKNVEDGSSRSRTREADDSRGKNVVPNSVKVGNVCSGKSTMTVVKKKKIVKKVVKKATANSKTSVSNSLPAKRLPGTVKVESAALSSSTASVPDKIGANSDEKRNIVDEVAGPDCLHSLPKEENVLKEDKEGGLLQLSLGPDSTSQECSRSDKDSDSREVSRFEVERDGNILKFPSCAFSSEDKKSDSDCLDANNNVLDNGNIISMHDNSNTSDCLDANNSVPNTYMVTEFLSGSTISEVNHMDYDNKQLCQNEVSLSLGKYSNVQSPLNNNLEDVGDELLKTSDTFSSSRKTRIQDGLDCLQHASALKHISDDGSSNLEDCISVHCSGIMDDAGKQLTHGDVTIHPENCETEKAFPNSNILAGSGEGDSKKIKKRRSRTQLNFLSSEMESLSTDHVNPVSLANNVDGITSLLSKDPSASEVLDQSVENDVDSITGLDGVTALHEKGGVLETQFYAANNSNDDASEVSPSSKRKKVTANPIFTHCQSEISAMIVVTTTSNAEAPINFNDNQEHQKEVALSSMGMCIPSSAQSMPYSEDITKMSVNILSGGSFDFIDANRETSFSPCEDLAFQNDQFSPLEGECTENITPVVLVSDTHTDVLGLGNIMGEKTDLHAVKENYQYKDFAQRSPRADMEPNDLNVKNDSLAQQNLMSCPASGDEVTTSNSNDELIVDAPGALSDIFSQGMASEVPDRRVLELTAINDENICGVEENTSSVQETKQNSRSDHAFGHNMMIKKTISEPSQVSSKVTTQALNSYRFGLSGTKNQSGRVIPKTFPGHSLTFSRSETKTSASSTHVSKPRTWHRTGNNPPISLPRINSVGTIPSKRPILERKGNFQNTSYVRKGNSLVRKPTAVSALPQISSVNQSSSLGFDDISKSTKSESRADFTNQPMYLRAGATYSQQRQRTPPLPIDTKSEENTSSSLVEPPSGGSCENVSDPTSFIEINNNVRNSSEDTLKHYEIPENQPVPLDNGESQVEANNGNPLSLNTKRIVYIKPKTNQLVATSNSCDVSVPADDNGQTAFSDGYYKRRKNQLVRTTFECHNNQTAVVPNGKANSDGQGTSNALCNRRFSKKRLNKVGRSSCKRSRASLVWTLCSKSSSENDRNSRHYQKVLPQLFPWKRATFASSFNSSSVSAISKKLLQLRKRDTVYTRSKHGFSLWKSRVLGVGGCSLKWSKSIEKNSKQANEEATLAVAAVEKKKREQKNAVCISSQSKRERIFRIGSVRYRMDPSRRTLQRISVDESQSSASTSSGLASKSAYIPRRLVIGSDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHQVIPERMPDCSYFLQGLCSNSNCPYRHVNVNPNASICEGFLRGYCADGNECRKKHSYVCPTFEATGTCTEGAKCKLHHPKKQRKGKKRKRSGDQNNTRGRYFGSIPADVSESGLMVAPKRHKQSEIEEELSDYISLDVVSEEVADTDDLSFDPAVFCENDSLDDFDELIKPVLLLKRKFTSQSPNSHILEASAGDVGRLLMR* 1987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00921 1986 MobiDBLite consensus disorder prediction 110 149 - -
Phac1g00921 1986 PANTHER CCCH ZINGC FINGER 263 1962 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 121 135 - -
Phac1g00921 1986 SUPERFAMILY beta-sandwich domain of Sec23/24 29 150 - -
Phac1g00921 1986 Gene3D - 1815 1878 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 356 389 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 1322 1361 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 1 82 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 1394 1409 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 1193 1245 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 1863 1877 - -
Phac1g00921 1986 ProSiteProfiles Zinc finger C3H1-type profile. 1815 1842 IPR000571 GO:0046872
Phac1g00921 1986 ProSiteProfiles Zinc finger C3H1-type profile. 1733 1762 IPR000571 GO:0046872
Phac1g00921 1986 MobiDBLite consensus disorder prediction 258 272 - -
Phac1g00921 1986 SMART c3hfinal6 1734 1761 IPR000571 GO:0046872
Phac1g00921 1986 SMART c3hfinal6 1842 1864 IPR000571 GO:0046872
Phac1g00921 1986 SMART c3hfinal6 1762 1786 IPR000571 GO:0046872
Phac1g00921 1986 SMART c3hfinal6 1815 1841 IPR000571 GO:0046872
Phac1g00921 1986 SMART c3hfinal6 1788 1813 IPR000571 GO:0046872
Phac1g00921 1986 MobiDBLite consensus disorder prediction 231 246 - -
Phac1g00921 1986 Coils Coil 1612 1632 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 560 587 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 572 587 - -
Phac1g00921 1986 FunFam zinc finger CCCH domain-containing protein 3 1763 1814 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 218 275 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 1863 1888 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 1390 1409 - -
Phac1g00921 1986 FunFam Zinc finger CCCH domain-containing protein 7 1816 1877 - -
Phac1g00921 1986 Gene3D - 1760 1814 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 419 446 - -
Phac1g00921 1986 ProSiteProfiles Zinc finger C3H1-type profile. 1788 1814 IPR000571 GO:0046872
Phac1g00921 1986 MobiDBLite consensus disorder prediction 407 456 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 39 67 - -
Phac1g00921 1986 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00921 Phac-Chr1 8196824 8206299 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac1g00921 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00921 - - vun:114193719 3244.52