Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00920 ATGGATCAGCACCACTTCCTCCACCACCACCACTACCACCACCCTCAGGACCACCGCACAACCCGCTACACTTCCCTCAACCCTCAATCGCATCACCACCACCACCATAACAACCTTCCTCCGCCGCCGCCCGCTCCGCCACCGCCTCTCTCCTACCACCGCACCCTCCACACGCCTCCCGCGCCGCAACCCTACACCCCTTCTACACCCCAACACCAACAACAGCAGCAACAGCAACAACAATTCTCTTTCAACCATCACACAACTCTCCCACACCGCTCCCTCGAAGATGATTCACGCTCTCTCCCCTACGACCTCCTCCCTCGCCGCACCTCTGCCATCCCCTGGAACCCTAACCCTAGAACTGACGATTTCGACCGCGAATTTCACCACCACCACCACCGCCCTCCGCCACCACCGCCTCCCCCGATCGAAACCCTACGCTACGACCCCGGGCGCCGTGACCGCCTCGTGGTGGATCCCTATGAGCAGAATCCCAGGGAGGCACTCGCGTGGGGAGGCGGTGACTACCACGCGCCGAGCCAGGGCGACGTAGAGCCTTCTCCTTACGTGCGCGTATACAGTGTGGAATGTGATGCTGACGTGGCGGGCAGAGGGTCCCGGGTCGAGAGCAAGAGGTGGGTGATGAGTGATAGAGAGAGGGAGAGGGGAAGAGAGTTGCACGAGTCTTCTTCTAATTTGGTTAGCAAGGGTAGTAACAGTGATAAATATTATCATGGTTCTGACAATGTGGGTAGGTATAGTAGAGGGAATAGCAGAGAGTGTGGTCATGAATTCGCACGCACTCCTCCTAAGAAACAGGTGCAGAAGAAGAGCGCGCTTCTTAGGATTCAGACTGTTAAACCTAATCATAGGAATCGTGAGGTTGAGCAGTCACGGTACCCCGGTTATGGACCTGAAGGTAGCAATGGCTTTTTCAGGGGGAAGGAGCAATATTTGGCTCATGGGGTTAAGGGGGAAGAGAGAGAAGGGAGCCCTGTTGAGATTGATATCTCTTTTGAGTCCAATTCTCTGGTGGCCAAGGCTATTGTTGCGCCGCCTTCAAGTTCAGTGTCTGTTCCTGATTTGAATGTGACGCCGGTTTTGGATTCGGATTTGGGTTCTGGGGATAGGAATAAAAGGGTTTCGGGCTCTGATGGCTATTTTCCGGGTTTGCAGCAGCCGTTTAGAGTGTCTTCTGTTGTGGTTGTGGATTTAAATAGGTCGCCTAGTAAAGGGAATGATAGGTCTAGTTTGGGGAAGGAGGTTAATGTGCGGAAGAATGTTGAGGATGGTTCTTCTCGGTCTCGCACCAGGGAGGCTGATGATTCTCGTGGGAAAAATGTGGTGCCAAATTCGGTCAAAGTTGGCAATGTCTGTTCTGGTAAATCGACCATGACGGTTGTCAAGAAGAAGAAAATTGTCAAGAAAGTGGTGAAGAAAGCCACTGCAAACTCTAAGACATCTGTGTCAAATTCACTGCCGGCAAAAAGGCTTCCTGGAACTGTGAAAGTGGAGAGTGCTGCACTGAGTTCGTCAACTGCCTCTGTTCCTGACAAAATTGGAGCTAATTCAGATGAGAAAAGGAACATTGTTGATGAGGTGGCTGGGCCAGACTGTTTGCACTCTTTGCCAAAGGAAGAAAATGTATTGAAAGAAGATAAAGAGGGAGGTTTACTGCAGCTGAGTTTGGGGCCAGATTCCACATCGCAAGAGTGTAGTAGGAGTGACAAAGATTCTGATAGTAGGGAAGTATCCAGGTTTGAAGTTGAAAGAGATGGAAACATTCTAAAATTTCCATCTTGTGCATTTAGTAGTGAAGATAAGAAGAGTGATTCAGATTGTTTAGATGCAAATAATAATGTCCTTGATAATGGAAATATTATTTCTATGCATGATAATTCAAATACTTCTGATTGTTTAGATGCAAATAATTCTGTTCCAAATACTTACATGGTTACTGAATTCTTAAGTGGAAGCACTATTTCTGAAGTCAATCACATGGATTATGATAATAAGCAATTGTGTCAGAATGAAGTGTCTCTATCACTTGGGAAATATTCAAATGTACAGTCCCCACTGAATAACAATCTTGAAGATGTAGGGGATGAACTATTAAAAACCAGTGATACTTTTTCAAGTTCAAGAAAAACTAGGATTCAAGATGGTCTAGATTGCCTACAACATGCCAGTGCACTGAAGCACATTTCTGATGATGGATCATCTAATTTAGAAGATTGTATTAGTGTTCACTGCTCTGGTATCATGGATGATGCTGGAAAGCAATTGACCCATGGTGATGTCACCATACACCCTGAGAATTGTGAGACAGAAAAAGCATTTCCAAATTCTAATATTTTAGCTGGATCTGGTGAAGGGGACTCAAAGAAGATAAAAAAGAGAAGATCTAGAACACAATTAAATTTTTTGAGTTCAGAGATGGAGTCCTTATCTACAGATCATGTAAATCCTGTTAGCCTTGCAAATAATGTGGATGGAATCACAAGTCTGTTGTCGAAAGATCCATCTGCTTCTGAAGTTTTAGATCAATCTGTTGAAAACGATGTTGACTCAATAACTGGTCTGGATGGGGTTACTGCTTTACATGAGAAAGGGGGGGTTTTAGAGACTCAGTTTTATGCTGCAAATAACAGCAACGATGATGCAAGTGAGGTTTCACCATCTTCTAAAAGGAAAAAAGTGACAGCTAACCCAATTTTCACTCATTGTCAATCGGAAATCAGTGCTATGATTGTAGTTACCACAACGTCTAATGCTGAAGCTCCTATCAATTTCAATGATAACCAAGAACATCAGAAAGAAGTTGCTTTGTCAAGCATGGGTATGTGTATTCCGTCTTCTGCTCAGTCAATGCCTTATTCGGAGGATATTACTAAAATGTCTGTCAATATTTTGAGTGGAGGATCTTTTGACTTCATTGATGCAAATAGGGAAACCTCTTTTTCACCATGTGAGGACTTGGCATTTCAAAACGATCAGTTCTCACCATTGGAAGGTGAGTGCACAGAAAACATTACTCCAGTTGTGCTTGTGAGTGATACTCACACTGATGTTTTAGGTCTTGGAAATATAATGGGAGAAAAGACTGATTTACATGCCGTTAAGGAAAATTACCAATATAAAGACTTTGCGCAAAGGTCACCAAGAGCTGATATGGAACCTAATGATCTCAATGTGAAGAATGATTCGCTTGCTCAGCAGAACCTTATGTCCTGTCCAGCCAGTGGTGACGAAGTCACTACAAGTAATTCGAATGATGAATTGATTGTGGATGCACCTGGTGCATTATCAGATATCTTTTCTCAAGGGATGGCATCTGAAGTACCGGATAGAAGGGTTTTAGAATTGACAGCAATCAATGATGAAAATATCTGTGGGGTTGAAGAAAATACTTCATCAGTACAGGAGACGAAACAGAACAGTAGGTCAGATCATGCATTTGGACATAATATGATGATAAAGAAAACAATTTCAGAACCATCCCAAGTATCTTCCAAAGTTACAACTCAGGCTCTAAATTCATATCGTTTTGGGTTGAGTGGGACCAAAAATCAGTCAGGTAGGGTAATTCCCAAAACTTTTCCAGGTCATTCTCTTACCTTTTCAAGATCGGAGACAAAGACATCTGCCTCTTCAACTCATGTATCAAAGCCTCGAACTTGGCATCGTACAGGTAATAATCCCCCTATTTCTCTACCTAGAATCAATTCAGTAGGAACAATTCCTTCGAAAAGACCAATTCTTGAAAGGAAAGGGAACTTTCAAAATACCTCATATGTGCGTAAAGGAAACAGTCTTGTAAGGAAACCTACTGCAGTTTCTGCTCTACCTCAAATCTCCTCTGTTAATCAGTCATCTTCTTTGGGCTTTGATGACATATCAAAAAGCACTAAATCTGAAAGCAGGGCTGATTTTACAAATCAACCAATGTACCTGAGAGCAGGAGCAACATATTCTCAGCAGAGGCAGAGAACACCTCCACTACCAATTGACACCAAATCCGAGGAAAATACATCTTCCTCACTGGTAGAACCTCCATCTGGTGGTTCCTGTGAAAATGTATCAGATCCTACGTCATTTATAGAAATTAATAATAATGTACGGAACTCTTCTGAAGACACACTGAAGCATTATGAAATTCCTGAAAACCAACCTGTTCCATTGGACAATGGGGAGAGTCAAGTAGAAGCAAACAATGGCAATCCTCTTTCTTTGAATACGAAGAGAATAGTATATATAAAGCCCAAAACGAATCAATTGGTTGCAACATCAAATTCTTGTGATGTTTCTGTCCCTGCTGATGACAATGGTCAAACTGCCTTCTCTGATGGCTACTACAAGAGAAGAAAAAATCAATTGGTTAGGACTACATTTGAATGCCACAACAACCAGACTGCTGTAGTGCCTAATGGCAAGGCAAATTCTGATGGACAAGGAACTAGTAATGCTCTTTGCAATAGGAGGTTTAGTAAGAAGCGCTTAAATAAGGTTGGCAGGAGTTCATGCAAACGTTCAAGAGCCTCACTAGTGTGGACACTCTGTAGCAAAAGTTCTTCTGAAAATGATAGGAATTCACGTCATTATCAAAAGGTTTTGCCTCAATTGTTTCCATGGAAAAGAGCAACATTTGCTTCAAGTTTCAATAGCAGTTCCGTATCTGCAATCAGCAAAAAATTGCTTCAATTGAGAAAGAGGGATACTGTTTACACTAGGTCAAAACATGGGTTTTCACTTTGGAAATCCAGAGTTTTAGGTGTTGGCGGGTGTAGTTTAAAATGGTCCAAATCCATTGAGAAGAACTCAAAGCAAGCTAATGAGGAAGCTACACTTGCTGTTGCCGCAGTAGAGAAGAAGAAGAGAGAACAGAAAAATGCGGTTTGCATCAGTTCTCAGTCAAAGAGAGAGCGTATATTTCGTATTGGCTCAGTTCGTTACAGAATGGATCCTTCCAGGAGGACACTTCAGAGGATTTCAGTCGATGAATCCCAGTCCTCGGCATCTACCAGTTCAGGTTTGGCTTCCAAAAGTGCTTACATTCCAAGGAGATTAGTGATTGGAAGTGATGAATACGTACGAATTGGAAATGGTAACCAGCTTATCAGAGACCCAAAAAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGAAAGCAGTATTGTCAGTTTTTTACCAGATTTGGGAAATGTAAAAAGGATGGAGGGAAGTGTCCTTATATTCACGATCCTTCAAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTAACGCACCAGGTTATTCCAGAGAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCTCAAACAGTAATTGTCCATATAGACATGTCAATGTGAACCCCAATGCATCTATTTGTGAAGGATTTCTCAGGGGTTATTGTGCTGATGGGAATGAGGTATTAACCAATCAATGTCGGAAGAAGCACAGCTATGTGTGTCCTACTTTTGAAGCAACAGGTACCTGTACTGAAGGAGCCAAATGCAAACTTCATCATCCAAAAAAACAGAGGAAGGGAAAGAAAAGGAAGAGATCTGGAGATCAGAACAACACTAGAGGGCGCTATTTTGGTTCTATTCCTGCTGATGTTTCTGAATCTGGGTTGATGGTGGCTCCAAAGCGACATAAACAAAGTGAAATTGAAGAGGAACTGTCTGATTACATCAGCCTTGATGTTGTCAGTGAAGAAGTCGCAGACACTGATGATCTATCATTTGATCCAGCAGTGTTCTGCGAGAATGATTCCTTGGATGATTTTGATGAACTCATTAAACCAGTTCTTCTATTGAAAAGAAAGTTCACATCACAATCACCTAACTCCCATATCCTCGAAGCAAGTGCCGGAGACGTCGGTCGTTTGTTAATGAGGTAA 5976 0.4285 MDQHHFLHHHHYHHPQDHRTTRYTSLNPQSHHHHHHNNLPPPPPAPPPPLSYHRTLHTPPAPQPYTPSTPQHQQQQQQQQQFSFNHHTTLPHRSLEDDSRSLPYDLLPRRTSAIPWNPNPRTDDFDREFHHHHHRPPPPPPPPIETLRYDPGRRDRLVVDPYEQNPREALAWGGGDYHAPSQGDVEPSPYVRVYSVECDADVAGRGSRVESKRWVMSDRERERGRELHESSSNLVSKGSNSDKYYHGSDNVGRYSRGNSRECGHEFARTPPKKQVQKKSALLRIQTVKPNHRNREVEQSRYPGYGPEGSNGFFRGKEQYLAHGVKGEEREGSPVEIDISFESNSLVAKAIVAPPSSSVSVPDLNVTPVLDSDLGSGDRNKRVSGSDGYFPGLQQPFRVSSVVVVDLNRSPSKGNDRSSLGKEVNVRKNVEDGSSRSRTREADDSRGKNVVPNSVKVGNVCSGKSTMTVVKKKKIVKKVVKKATANSKTSVSNSLPAKRLPGTVKVESAALSSSTASVPDKIGANSDEKRNIVDEVAGPDCLHSLPKEENVLKEDKEGGLLQLSLGPDSTSQECSRSDKDSDSREVSRFEVERDGNILKFPSCAFSSEDKKSDSDCLDANNNVLDNGNIISMHDNSNTSDCLDANNSVPNTYMVTEFLSGSTISEVNHMDYDNKQLCQNEVSLSLGKYSNVQSPLNNNLEDVGDELLKTSDTFSSSRKTRIQDGLDCLQHASALKHISDDGSSNLEDCISVHCSGIMDDAGKQLTHGDVTIHPENCETEKAFPNSNILAGSGEGDSKKIKKRRSRTQLNFLSSEMESLSTDHVNPVSLANNVDGITSLLSKDPSASEVLDQSVENDVDSITGLDGVTALHEKGGVLETQFYAANNSNDDASEVSPSSKRKKVTANPIFTHCQSEISAMIVVTTTSNAEAPINFNDNQEHQKEVALSSMGMCIPSSAQSMPYSEDITKMSVNILSGGSFDFIDANRETSFSPCEDLAFQNDQFSPLEGECTENITPVVLVSDTHTDVLGLGNIMGEKTDLHAVKENYQYKDFAQRSPRADMEPNDLNVKNDSLAQQNLMSCPASGDEVTTSNSNDELIVDAPGALSDIFSQGMASEVPDRRVLELTAINDENICGVEENTSSVQETKQNSRSDHAFGHNMMIKKTISEPSQVSSKVTTQALNSYRFGLSGTKNQSGRVIPKTFPGHSLTFSRSETKTSASSTHVSKPRTWHRTGNNPPISLPRINSVGTIPSKRPILERKGNFQNTSYVRKGNSLVRKPTAVSALPQISSVNQSSSLGFDDISKSTKSESRADFTNQPMYLRAGATYSQQRQRTPPLPIDTKSEENTSSSLVEPPSGGSCENVSDPTSFIEINNNVRNSSEDTLKHYEIPENQPVPLDNGESQVEANNGNPLSLNTKRIVYIKPKTNQLVATSNSCDVSVPADDNGQTAFSDGYYKRRKNQLVRTTFECHNNQTAVVPNGKANSDGQGTSNALCNRRFSKKRLNKVGRSSCKRSRASLVWTLCSKSSSENDRNSRHYQKVLPQLFPWKRATFASSFNSSSVSAISKKLLQLRKRDTVYTRSKHGFSLWKSRVLGVGGCSLKWSKSIEKNSKQANEEATLAVAAVEKKKREQKNAVCISSQSKRERIFRIGSVRYRMDPSRRTLQRISVDESQSSASTSSGLASKSAYIPRRLVIGSDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQYCQFFTRFGKCKKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHQVIPERMPDCSYFLQGLCSNSNCPYRHVNVNPNASICEGFLRGYCADGNEVLTNQCRKKHSYVCPTFEATGTCTEGAKCKLHHPKKQRKGKKRKRSGDQNNTRGRYFGSIPADVSESGLMVAPKRHKQSEIEEELSDYISLDVVSEEVADTDDLSFDPAVFCENDSLDDFDELIKPVLLLKRKFTSQSPNSHILEASAGDVGRLLMR* 1992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00920 1991 MobiDBLite consensus disorder prediction 110 149 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 121 135 - -
Phac1g00920 1991 Gene3D - 1760 1815 - -
Phac1g00920 1991 SUPERFAMILY beta-sandwich domain of Sec23/24 29 150 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 1868 1891 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 356 389 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 1193 1239 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 1322 1361 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 1 82 - -
Phac1g00920 1991 SMART c3hfinal6 1734 1761 IPR000571 GO:0046872
Phac1g00920 1991 SMART c3hfinal6 1762 1786 IPR000571 GO:0046872
Phac1g00920 1991 SMART c3hfinal6 1788 1813 IPR000571 GO:0046872
Phac1g00920 1991 SMART c3hfinal6 1842 1869 IPR000571 GO:0046872
Phac1g00920 1991 MobiDBLite consensus disorder prediction 218 276 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 1394 1409 - -
Phac1g00920 1991 ProSiteProfiles Zinc finger C3H1-type profile. 1733 1762 IPR000571 GO:0046872
Phac1g00920 1991 MobiDBLite consensus disorder prediction 258 272 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 231 246 - -
Phac1g00920 1991 Coils Coil 1612 1632 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 560 587 - -
Phac1g00920 1991 PANTHER CCCH ZINGC FINGER 263 1967 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 1868 1882 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 572 587 - -
Phac1g00920 1991 FunFam zinc finger CCCH domain-containing protein 3 1763 1814 - -
Phac1g00920 1991 FunFam Zinc finger CCCH domain-containing protein 7 1816 1882 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 1390 1409 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 419 446 - -
Phac1g00920 1991 ProSiteProfiles Zinc finger C3H1-type profile. 1788 1814 IPR000571 GO:0046872
Phac1g00920 1991 ProSiteProfiles Zinc finger C3H1-type profile. 1842 1870 IPR000571 GO:0046872
Phac1g00920 1991 MobiDBLite consensus disorder prediction 407 456 - -
Phac1g00920 1991 Gene3D - 1816 1883 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 39 67 - -
Phac1g00920 1991 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00920 Phac-Chr1 8196824 8206299 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac1g00920 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00920 - - vun:114193719 3238.36