Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00907 ATGGCAAAAATGAGAATTAAGGACAAGCAAAAGCATCTGACCAGACTGACCGTGTTATTACTGATGGCTTTAGCAGCAGCCGGCCAAACCCTGCCCGGCTGCCAGGACTCCTGCGGAAATGTTTCAATTCCGTATCCGTTTGGCATCGGCCATTCATCCACCGATAAAAAAAACTGCTTTCTTGAGGAACCTTTGGAGCTTACATGCACAGACTCAGCCTTATTTCAGGGTAACGTCCAAATTCTCAACATAAGCCTCGCCGGTAAAATGGACGTGCTCACCTTCATCGCCGGGGTTTGCAAAAACGATTCGCTTGGTAGAGTAGACACACATGGTAACGAACCCACTCTCAGCACACCGGCTTTCATAATTTCTAGTGAGGACAACAAGTTCGTAAGCGTAGGGTGCGACACTTACGGCTATCTCAACAGTTTTCATAACGGCACAGAATCTTCAACGGGGTGCTTGACCAGATGCAACAGCTTAGAGAGCGTTGAAAACATGCAGAGAAGCGGAAACTGTACGGGCATAGGGTGTTGCCAGGTGGACATTCCTCCTGGGATGAAGAATATTAGCTTGCAAGCATTTAGCTTCAACAATTTCAATTCCACTTCCGATTTCAACCAGTGCGGCTTCTCCTTTGTGGTCAAAAATGGCAACTACACTTTCTCCCTCGATCATTTGAAGAGCATCCCGTTCGATAAGGCACTCATGGTCATCGATTGGAGTGTAGGAAACGATACGTGCGACGCTTCCATGCATACAGAAGATTATGCATGCAAGAGTGATAATAGCTATTGCGAGAACTCGCCCTATGAATATGGTTACCGATGCAAATGTAATCCAGGCTTTGAGGGAAACGCATACCTTCTCCATGGTTGCCAAGACGTTCCGGAGTGTACAAGGAAGCAACACAATTGCGACAGTGAAGATCATTGTAGAGAAACATCTGGCTCTTTTGAATGTTTCTGTCCTGACGGACTAATCGGAAATGGGACAAAAGAAGGCGGAGGATGCCACCCAAAGCAGCAGGCTGATCCATTTATCAAGATCGTTATTGGTGCAAGTGTAGGATTAATTGCTCTGTTTATAGGGGTTTCTTGGCTATACTTGATACACCAGAAAAGGAAAGTCCTTAAATTAAAGGAGAAGTTCTTTCGACAGAATGGAGGCATCATTTTGAGACAACAACTCTCCACTAGGAAAGACTCATCTCAGTCCACTACAATTTTCAGTGCAGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGCTTAATCATAGGTAAAGGAGGATATGGTACAGTTTTCAAAGGACTTCTCTCAAATAACAAAGTTGTTGCTATCAAGAAGTCCAAAATAGTGGATCAGAGTCAGGTGGAGCAATTCATTAATGAGGTCATTATACTCTCACAAATTAATCACAGGAACGTGGTCAAACTCTTGGGATGTTGCCTAGAGACAGAAGTTCCCTTACTGGTTTATGAATTTGTTAACAATGGCACCCTTTTTGATTATTTACATAAACAAGGAGAGATGGTCAATGTGTCTTGGAAAACGCGTCTAAGGATAGCTACAGAGACAGCTGCAGCTCTTTCATATCTACACTCGGCAGCTTCCATACCCATCATCCACAGAGATGTGAAGACTGCAAACATACTCTTGGATGAAACTTACACTGCCAAAGTGTCTGACTTTGGAGCTTCAAGATTGGTTCCTCTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGCTATTTAGACCCAGAGTACATGCAATCAAGCCAGTTGACTGAAAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTGTAGAACTACTAACAGGGGAGAAACCTTTCTGTTTTGACAAGGCAGAAGAGAAACGAAGTCTCACGGTTCACTTTCTATGTAGCTTGAAAGAGGATCGTCTATTTGATGTTCTTCAAGTGGGTATTTTGGATGAAGAAAACAAGCAGGAGCTTATGGAGGTTGCTATTCTTGCTGCTAGGTGCCTGAGACTTACAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAAGCTTACAGAGAAACACCCTTGGATCAATACAGGCGAAAACTTTGAGGAGGATCAATACTTGCTTCATGAGGCACAAAGCTCTCGTCAACATGGTGATAGTAGTAGTGCCCAACAAAATACTGGATATGATAGCTTGAGAGCACTTGAATTAATTGACTTGGATAATGGAAGATGA 2265 0.4353 MAKMRIKDKQKHLTRLTVLLLMALAAAGQTLPGCQDSCGNVSIPYPFGIGHSSTDKKNCFLEEPLELTCTDSALFQGNVQILNISLAGKMDVLTFIAGVCKNDSLGRVDTHGNEPTLSTPAFIISSEDNKFVSVGCDTYGYLNSFHNGTESSTGCLTRCNSLESVENMQRSGNCTGIGCCQVDIPPGMKNISLQAFSFNNFNSTSDFNQCGFSFVVKNGNYTFSLDHLKSIPFDKALMVIDWSVGNDTCDASMHTEDYACKSDNSYCENSPYEYGYRCKCNPGFEGNAYLLHGCQDVPECTRKQHNCDSEDHCRETSGSFECFCPDGLIGNGTKEGGGCHPKQQADPFIKIVIGASVGLIALFIGVSWLYLIHQKRKVLKLKEKFFRQNGGIILRQQLSTRKDSSQSTTIFSAEQLKKATNNFDESLIIGKGGYGTVFKGLLSNNKVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYLHKQGEMVNVSWKTRLRIATETAAALSYLHSAASIPIIHRDVKTANILLDETYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFCFDKAEEKRSLTVHFLCSLKEDRLFDVLQVGILDEENKQELMEVAILAARCLRLTGEERPSMKEVAMELEGIKLTEKHPWINTGENFEEDQYLLHEAQSSRQHGDSSSAQQNTGYDSLRALELIDLDNGR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00907 754 Pfam Wall-associated receptor kinase galacturonan-binding 34 88 IPR025287 GO:0030247
Phac1g00907 754 Pfam Calcium-binding EGF domain 296 329 IPR001881 GO:0005509
Phac1g00907 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 703 IPR045274 GO:0007166
Phac1g00907 754 Pfam Protein kinase domain 427 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00907 754 SMART egf_5 248 295 IPR000742 -
Phac1g00907 754 SMART egf_5 299 340 IPR000742 -
Phac1g00907 754 CDD EGF_CA 296 330 - -
Phac1g00907 754 CDD STKc_IRAK 429 696 - -
Phac1g00907 754 ProSiteProfiles EGF-like domain profile. 296 334 IPR000742 -
Phac1g00907 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Phac1g00907 754 FunFam Wall-associated receptor kinase 2 393 498 - -
Phac1g00907 754 Gene3D Phosphorylase Kinase; domain 1 390 498 - -
Phac1g00907 754 Gene3D Transferase(Phosphotransferase) domain 1 499 716 - -
Phac1g00907 754 SUPERFAMILY Protein kinase-like (PK-like) 402 694 IPR011009 -
Phac1g00907 754 ProSiteProfiles Protein kinase domain profile. 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00907 754 SUPERFAMILY EGF/Laminin 295 331 - -
Phac1g00907 754 FunFam Fibrillin 2 291 335 - -
Phac1g00907 754 SMART serkin_6 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00907 754 FunFam Wall-associated receptor kinase 2 499 716 - -
Phac1g00907 754 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Phac1g00907 754 Gene3D Laminin 246 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00907 Phac-Chr1 8054300 8058654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00907 19 754 Receptor kinase-like Gene Family AT1G21230 43.709 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phac1g00907 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00907 - - gmx:100819535 1137.48