Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00889 ATGTCATTGGTTATATCTACGGAGTTGGCTGATACATCGTATGGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTACACCTGATCTGTCCTCCCACAATTTTGTTCCAGATAAGCACAGAAACATGTATATCACAGATTCTTACTCCAGTGAGAATTATGAAAAGTACTTCCGTTATTCACCATCAGAAGAACTGATAGAACCGTCTAGTTCCAGCATATCAGGAAATTCAGTTCACCCTGATGGTGCCTCTTCTTACCTACTCAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACACTCGTATCCTGTCTACAAGGCGTCGCAATGCCTATCAGTCCAATTTTGAATCAGATTTCGTGGAAAATAGGAGCCCTGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAACTACAAGAATTGGAGAGGGTTTTGTTTTCTGATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGTCCAAAGCATGGAGATTGATCCTGACTTGGCCGAGTGGGCCAATCCGCTTCAAGATATGCTACTTCATGACTCACCAAAGGAGTCCTCATCCTCAGATTCTTCCAATATTAGCAGCATAAGTAGCACTACCAAAGAAACTTCACAAAACTCGCCCCAGACCCCCAAACAATTACTCTGTGATTGTGCTAGAGCACTTTCAGAAGGAAATGAAGAGCAAGCCACATCTATGATAAACAATCTCAGGCAAATGGTCTCAATTCAGGGGGAACCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGTGTTGCTTCATCTGGAAAATGCATCTATCAAGCATTGAGATGCAAAGAACCTCCTTCTTCAGATCGCCTGGCAGCTATGCAGATCCTATTTGAGGTCTGCCCGTGTTTTAAATTCGGATTCATTGCTGCAAATGGCGCCATAGCTGAGGCTGTTAGAGATGAAAAGAAGGTTCACATAATAGACTTTGACATCAGCCAAGGAACTCAGTACATAACTCTAATACAAACACTTGCATCAATGCCAGGTAGACCACATCATGTGAGATTAACCGGGGTGGATGATCCTGAGACTGTGCAGCGCTCCATTGGTGGCATGAGCATCATAGGACAAAGGCTTGAAAAGCTGGCAGAGGAACTTGGATTGCCATTTGAGTTTCAAGCAGTGGCTTCAAAGACCTCAATTGTCTCACCATCAATGCTCAATTGTCGTCCGGGTGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGAGACCAACTTCTTCGCATGGTTAAGTGCTTGAATCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTCTGCTGTGTTTGACACACTTGATGCAACTCTACCAAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTGGCAAAGGACATTGTCAACATTGTGGCTTGTGAGGGGGAGGATCGAATAGAACGGTATGAAGTCGCCGGAAAGTGGAGGGCAAGGTTGACAATGGCTGGCTTCACTCCATCCCCAATGAGCACAAATGTGAGAGAAGCAATTAGGAAACTGATTATTAAGCAGTACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1776 0.4403 MSLVISTELADTSYGNAKLYTLKGTDVTPDLSSHNFVPDKHRNMYITDSYSSENYEKYFRYSPSEELIEPSSSSISGNSVHPDGASSYLLRASSGASVIVNNPFDTRILSTRRRNAYQSNFESDFVENRSPDGLDFDGEMRLKLQELERVLFSDEEEEEEDIFETVQSMEIDPDLAEWANPLQDMLLHDSPKESSSSDSSNISSISSTTKETSQNSPQTPKQLLCDCARALSEGNEEQATSMINNLRQMVSIQGEPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPHHVRLTGVDDPETVQRSIGGMSIIGQRLEKLAEELGLPFEFQAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKCLNPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPSPMSTNVREAIRKLIIKQYCDRFKIKEEMGALHFGWEDKNLIVASAWK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00889 591 Pfam GRAS domain family 221 591 IPR005202 -
Phac1g00889 591 ProSiteProfiles GRAS family profile. 211 591 IPR005202 -
Phac1g00889 591 MobiDBLite consensus disorder prediction 189 221 - -
Phac1g00889 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 203 586 IPR005202 -
Phac1g00889 591 MobiDBLite consensus disorder prediction 187 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00889 Phac-Chr1 7693821 7697744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00889 1 591 GRAS Transcription Factor Family AT1G21450 60.601 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac1g00889 GRAS 1.4e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00889 - - gmx:100807048 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00889 1 7693821 7697744 Phac1g00889 1 7693821 7697744 ECH
Phac1g00889 1 7693821 7697744 Phac9g01015 9 7783118 7786907 PCT