Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00848 ATGGACGGTGAACGGAGCATGCCTGCTCCATCTTATGGGCAAGTTGAGGGGGCTCAGAAAGTTAAAGCATTACATGGGAGGACCACTGGCCCTACAAGGCGTTCTACAAAAGGGCAATGGACATTAGAGGAGGATGATATCTTACGGAAGGCGGTTGAGAAATTTAAGGGAAAGAATTGGAAAAAAATTGCGGAATGTTTCAAGGAAAGGACTGATGTGCAATGCCTGCATAGGTGGCAGAAAGTTTTAAATCCTGAACTTGTTAAAGGTCCATGGTCTAAAGAGGAAGATGACATAATTATTGAATTGGTGAATAAAAATGGGGCTAAAAAGTGGTCATCTCTTGCACGACATTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGGTTAATCATCTTGATCCTACTATAAAAAAGGAAGCGTGGACTCAGGAAGAGGAGTTGGCTCTAATACATTATCATCAGATATATGGGAACAAATGGGCTGAGTTGTCAAAGTACATTCCTGGAAGGACAGACAATGCTATTAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTATTTGACATCTGGTGTGCTTAATCAGTTTGAGCCTGTACCTCATGTTGGAAATTCAAATCAATCAACAAGGTTGCAGTGTAGTGGTGATGATAATTGTTCCAAGAGGATGGAAGGAGAAGAAGTTTCGGAGTCCAGCCAAGGTTCAGCTAATGCTGTTCGCTTTCCATCTGCTAGAGGGATGGGCAGTGCTGAATTACAAACTGGAGAGGCGGTGTGTAGGCCAAATGAAGAATATAATCTCGGAAAGGATCATAGTCCAAGTCGAGCATCTTGTTCAGAGCCATATTATGTATCAATTGATGATATATGCATTCCTGAAATTTCTCACCAAGAGGCATGCACTTCTCAGTTCACTGAGCAACACTCTCATGAACCTGGAAATTCCGTAAGTGGGGATTGCCATTTCAATTTACATTCCTTACCCAATATTTCATCAATGGTCTTGGGACAGGATTCCTCCCAGTTGCAAAGAGATTGTGTAGCTTCTAGTGAAATCTGTGACATGGTGAATGCTCCATTTCAGACTTCAGAGGGGTTGGGTGTCTCAACGTCCATGGGACCTGCATCTTTGGATTCTCTTAAACCAGAGCATGTGTTGATATCTGATGATGAATGTTGCAGAGTTCTGTTTTCAGATTCAATGAATGATGGGTGTTTCCCCCCTGTAGATTATATTAAAGGTGAAGATACAGTTGAATTTTCTGGATGTACTTCGTTTCCTTGCCAATCTTGTAATATCCAGATGGCTGAAACTGGTGGAACCTCAACTCCTCTGTTAACTTGTCCTCGTTGTTCTAATAATTATCAAGGAACTTCGTCCTCCCTGTCTTTCCCTCCAGTACTTTCTGCTTGTGATGATAGGGAGGGGCCAACTGCCAATGGCAATCATTTATTTGGAACAAATGGTCACCAGTTGGTCTCCAGAGCACCTGCTAACTTCACTTATGTCAATTACGTATCCAGTTCTCCCTGTGTGGATGACATGGGTACAGCAGTAATGGAAGAACCACGTGATATTCTGAATGGTACTTCAGAGGAAAAGACAAATGTGCATACAGAAAAGGAGGACTCTGGATCTCTATGTTATGAACCTCCCCGTTTTCCAAGTTTGGATATTCCTTTCTTCAGCTGTGATCTTGTACAGTCTGGGGTTGATATGCAGCAAGAGTTTAGTCCCTTGGGTATCCGCCAGTTTATGATGTCTTCTATGAATTGTCTTACTCCTTTCAGGTTGTGGGACTCACCCTCTCATGGTGATAGTCCAGATGCATTGTTAAAAAGTGCAGCTAAAACTTTTACAGGTACACCATCTATATTAAAGAAACGACACCGAGATTTATTGTCACCACTCTCAGATAAAAGAATTGACAAGAAACTTGAGACTGACATGACTACCAAAAACATTTCCAGTTTGGATGTCATGTTTGGTGACAATGAGACTCAAGAAGCAGATATGCCTTCATTTAAAAAACAGAGCAGCAGTGCATATGTTGATGATAATAAAGAAAATTGCGGACAAGCTTATGAAAAGAACTCCCTCAAAGATACTGTAGACAATTCAAAGCCTAATGTAAAGCAACAGCCTAATGTAAAGCAACAGCAACTAACGACTGAAGCATCAGCTGCTGCGATGGAACAAGAACCTTCTGGAGTTTTGGTTGAACATGATGTGAATGACCTGACGCTGTCTTCTCCTGATCAAGTTGGTTTAAAATCAAACAGAGGTCTAGGTTCAAGTACTAAATCACCCAAAAGCATGAACAGGTCCTTGGAAGCAGTTCCAAATCAGAACAGCCATTTGAAATTATCTTCAAAAATTCCACGCTCAAGGATTAATTCTAGTTCTCCTTGTGTTCGTGCAAAGGAGCATGAAAAACTTTCGGTTGCTGTTACTCGTGTACAAGCTCCAGGGGACAATTCAGGGGAACAAACTAGAAAGGATGGTGGTTTTGAAACATGTAGCATATTCGGTGGAACACCTTTTAGGAAAGGCCTTGAATCACCTTCAGCATGGAAATCTCCTTGGTTCTTCAACACTTTTTTATGTAGCCCCAGACTTGGTACTGAAATTACAGTTGAGGATTTTGGGTATTTAATGAGCCCAGGTGATAGAAGCTATGATGCAATCGGATTGTTAAAACAGATCAGTGAACAAACTGCTGCTACATATGCCAATGCTAAAGAGGTTTTGGAAAATGAAACTCCTAAGGCAGCATCACGGAAAGATGCATCTGGAAACGAGGAGGATAACTACCATGGTTCCCCCAATCAGCCTGGGAACGATTCTCAATTGGCTTCAAATGCATTGATAGAGCGACGCACACTTGACTTTAGCGAGTGTGGATCACCAAGCAAGGTTGATGACAACAAATCCTCAGCTATAAGTTTCCCGAGCCCTTCTTCTTATCTGTTGAAAGGTTGTAGATGA 3006 0.4162 MDGERSMPAPSYGQVEGAQKVKALHGRTTGPTRRSTKGQWTLEEDDILRKAVEKFKGKNWKKIAECFKERTDVQCLHRWQKVLNPELVKGPWSKEEDDIIIELVNKNGAKKWSSLARHLPGRIGKQCRERWVNHLDPTIKKEAWTQEEELALIHYHQIYGNKWAELSKYIPGRTDNAIKNHWNSSVKKKLDSYLTSGVLNQFEPVPHVGNSNQSTRLQCSGDDNCSKRMEGEEVSESSQGSANAVRFPSARGMGSAELQTGEAVCRPNEEYNLGKDHSPSRASCSEPYYVSIDDICIPEISHQEACTSQFTEQHSHEPGNSVSGDCHFNLHSLPNISSMVLGQDSSQLQRDCVASSEICDMVNAPFQTSEGLGVSTSMGPASLDSLKPEHVLISDDECCRVLFSDSMNDGCFPPVDYIKGEDTVEFSGCTSFPCQSCNIQMAETGGTSTPLLTCPRCSNNYQGTSSSLSFPPVLSACDDREGPTANGNHLFGTNGHQLVSRAPANFTYVNYVSSSPCVDDMGTAVMEEPRDILNGTSEEKTNVHTEKEDSGSLCYEPPRFPSLDIPFFSCDLVQSGVDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSHGDSPDALLKSAAKTFTGTPSILKKRHRDLLSPLSDKRIDKKLETDMTTKNISSLDVMFGDNETQEADMPSFKKQSSSAYVDDNKENCGQAYEKNSLKDTVDNSKPNVKQQPNVKQQQLTTEASAAAMEQEPSGVLVEHDVNDLTLSSPDQVGLKSNRGLGSSTKSPKSMNRSLEAVPNQNSHLKLSSKIPRSRINSSSPCVRAKEHEKLSVAVTRVQAPGDNSGEQTRKDGGFETCSIFGGTPFRKGLESPSAWKSPWFFNTFLCSPRLGTEITVEDFGYLMSPGDRSYDAIGLLKQISEQTAATYANAKEVLENETPKAASRKDASGNEEDNYHGSPNQPGNDSQLASNALIERRTLDFSECGSPSKVDDNKSSAISFPSPSSYLLKGCR* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00848 1001 CDD SANT 91 135 IPR001005 -
Phac1g00848 1001 Gene3D - 89 140 - -
Phac1g00848 1001 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 755 811 - -
Phac1g00848 1001 FunFam Transcriptional activator Myb isoform A 36 88 - -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 205 244 - -
Phac1g00848 1001 FunFam Transcription factor MYB3R-2 142 204 - -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 1 38 - -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 926 941 - -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 942 962 - -
Phac1g00848 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 977 992 - -
Phac1g00848 1001 SMART sant 88 137 IPR001005 -
Phac1g00848 1001 SMART sant 140 188 IPR001005 -
Phac1g00848 1001 SMART sant 36 85 IPR001005 -
Phac1g00848 1001 Gene3D - 142 202 - -
Phac1g00848 1001 PANTHER MYB PROTEIN-RELATED 37 110 - -
Phac1g00848 1001 SUPERFAMILY Homeodomain-like 35 98 IPR009057 -
Phac1g00848 1001 Gene3D - 36 88 - -
Phac1g00848 1001 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Phac1g00848 1001 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Phac1g00848 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Phac1g00848 1001 CDD SANT 40 83 IPR001005 -
Phac1g00848 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 755 809 - -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 924 1001 - -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 707 736 - -
Phac1g00848 1001 FunFam Transcriptional activator Myb isoform A 89 141 - -
Phac1g00848 1001 CDD SANT 143 183 IPR001005 -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 205 222 - -
Phac1g00848 1001 MobiDBLite consensus disorder prediction 707 740 - -
Phac1g00848 1001 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Phac1g00848 1001 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Phac1g00848 1001 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Phac1g00848 1001 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00848 Phac-Chr1 7180859 7189744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00848 4 1001 MYB Transcription Factor Family AT4G32730 41.343 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g00848 Myb_DNA-binding 4.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00848 - K09420 gmx:100794559 1544.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00848 1 7180859 7189744 Phac1g00848 1 7180859 7189744 ECH