Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00839 ATGGACAACCGAAAAGTTGTTGTTTGTGACAACGGAACCGGGTATGTTAAATGTGGATTTTCTGGGGAGGATTTCCCCACATCGGTCTTTCCTTGTGTAGTGGGAAGGCCAATGCTTACCGAACAAGAGTTTAAGGATATTGTTGTTGGTGAAAGCTGTGCAGATTTGCCACATCAGCTTGATGTATCTTATCCTATGAACAACGGGATAGTGCAAAATTGGGATGATATGTGTCATGTATGGGATCATGCATTTTACAATGAATTGAAGATTAATCCTCCAGACTGCAAGATTCTACTCACCGATTCGCCTCTTAATCCTTCCCAGAATAGTGAAAAAATGGTTGAGATGATGTTTGAGAAGTACAATTTTGCTGGAGTGAATTTCCAACTCCAAGCTGTTCTGACATTATGTGCTCAAGGTTTATTTACTGGATTAGTTATTGAGTCTGGTGATGGTGTCACCCATGTGGTTCCTGTTGTTGATGGTTGTTCTTTCCCTCATGTAACTAAACGAATGAATGTTGCTGGTCGACATATAACCTCCTATCTTGTTGATTTGCTTTCAAGGAGGGGGTATGCATTAAATAGGACTGCTGATTTTGAGACAGTTAGGGAAATCAAAGAGAAGCTATGCTATATAAGTTACGACTACAAGAGGGAATACCAGTTGGGGCTTGAGACCACTATCCTTGTTAAAAATTATACTCCTTTCTGA 717 0.4017 MDNRKVVVCDNGTGYVKCGFSGEDFPTSVFPCVVGRPMLTEQEFKDIVVGESCADLPHQLDVSYPMNNGIVQNWDDMCHVWDHAFYNELKINPPDCKILLTDSPLNPSQNSEKMVEMMFEKYNFAGVNFQLQAVLTLCAQGLFTGLVIESGDGVTHVVPVVDGCSFPHVTKRMNVAGRHITSYLVDLLSRRGYALNRTADFETVREIKEKLCYISYDYKREYQLGLETTILVKNYTPF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00839 238 SMART actin_3 4 238 IPR004000 -
Phac1g00839 238 FunFam Actin, alpha skeletal muscle 1 153 - -
Phac1g00839 238 Pfam Actin 2 222 IPR004000 -
Phac1g00839 238 SUPERFAMILY Actin-like ATPase domain 2 148 IPR043129 -
Phac1g00839 238 Gene3D - 133 174 - -
Phac1g00839 238 Gene3D - 7 132 - -
Phac1g00839 238 SUPERFAMILY Actin-like ATPase domain 141 226 IPR043129 -
Phac1g00839 238 CDD NBD_sugar-kinase_HSP70_actin 7 184 - -
Phac1g00839 238 PANTHER ACTIN 6 236 IPR004000 -
Phac1g00839 238 PRINTS Actin signature 110 123 IPR004000 -
Phac1g00839 238 PRINTS Actin signature 135 154 IPR004000 -
Phac1g00839 238 PRINTS Actin signature 79 97 IPR004000 -
Phac1g00839 238 PRINTS Actin signature 25 34 IPR004000 -
Phac1g00839 238 Gene3D Actin; Chain A, domain 4 175 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00839 Phac-Chr1 7100199 7112682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00839 2 235 Cytoskeleton Gene Families AT1G49240 46.218 8.87e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00839 K17260 - gmx:100803980 440.269