LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g00831	ATGTGGCTACAAAAGCATCATTGTGACAAGAAGGATGGGGTGAATGGAATAGTGGCAGTGGCAATAGATTCAGACAAGGGGAGCCAGAGTGCACTAAAATGGACCATTGATCATCTCCTCACCAAAGGGTCAAATGTAGTTCTCATTCATGTCAAGCATAAACCATCTTCTCTTCATCCATCAGTTTCTCTTGTGAACCCTAGGGCAAATGGTATTGGTGAGCATGCACTTGTTTGCAAGGACCCTGATGAGCAAACCAAAGAAGTTTTCCATCCATACCGTGTATTCTGTGCAAGGAAAGATATACACTGCAAGGACACCGTAATAGAAGATGTAGATGTAGCCAAAGCTTTAATTGAATATGCTTCTCAATATGCAATTGAGCATTTAGTCATAGGCTCTTCACACAAAGGTGGTTTTCTTAGATTCAAGATAACAGATGTTCCAGGAACAGTCTCAAAAGGGGCACCAGATTTCTGCACAGTTTATGTTGTTGCTAAAGGGAAGATTCAATCCATGCGATCTGCTTCTCGTGCTGCTCCTGCCTTTTCCCCTCTTCAAAACCTACTTACTCAACCAGAACCACGTCTGCCTCTGGCTAACAATGTCAAAGGGCTTGAAAGAAGGTCTTTTGAAGCACCACCCCATGTATCACATGATGGATCAGATTCCTTCAGGTCTCCATTCACTAGGAGAGGAGTGAATAATGACAGGTATGGGGAAATTTCGGTGCCAGAAACTGACATAAGTTTTGTAAGCTCTAGAAGGTCAAGTACAGATCGCTTATTCCCTTCAATGTATACCAACAACAACCACTCAGAGACAGGAATATCCAACCCCCGACTATCGTATAGCTCTGACATTGATGGAAATAATTATAGCTTTGAGTCAGTGCATTTTGGAAGAAGGTCTATGGACATCAGCTCTGATTTCTCATCCTTCTCACAAGAGAGTGAGGGTTTATCATCCACTACATCACAAGGCATGGATGATGTGGAGGCTGAAATGAGAAGACTGAAACAGGAGCTGGAGCATACAATGGAAATGTATAGTAATGCCTGCAAAGAAGCACTCACCGCAAAGCAAAAGACTGTAGAACTCCAACGATGGAAAATAGAGGAAGAGAGGAAAATAGAGAAGGTAAGGCTTGCTGAAGAAGCTGCATTGGCAATCGCAGAAAAGGAGAAGTTAAAATCAAAAGCAGCCATGGAGACAGCTGAGGCACAGAAGAGGATTGCAGAACTGGAATCACAGAAGAGAATCAATGCAGAAATGAAAGCATTTAGAGAAACAGAAGAGAAAAGAAAAGCAGTGGATGCTTTATCAAACAATTGTTTAAGGTATAGAAGGTACACAATTGAGGCGATTGAAGCTGCCACAAATTTTTTTACTGAGTCACAAAAGATTGGGGAAGGGGGTTATGGTCCAGTTTATAAGTGCTTTTTGGACCATACACCTGTGGCAGTGAAGGTTCTACGTCCTGACGCAGCACAAGGAAGGTCACAATTTCAAAGAGAGGTTGAGGTACTGAGTTGCATTCGACATCCAAACATGGTTCTCCTCCTTGGAGCCTGCCCTGAGTATGGTTGCCTTGTGTATGAGTACATGGCCAATGGAAGCTTAGATGACTGCCTCTTCTGTCGAGGAAACGTGCCCCCAATTTCATGGCAACTCAGGTTTAAAATTGCAGCTGAAATTGGCACAGGCTTGTTGTTCCTCCATCAGACCAAACCTGAGCCTCTTGTGCATAGAGATCTTAAACCAGCCAACATCTTGCTGGACAGAAACTATGTCGCCAAGATCAGTGATGTAGGTTTGGCCAGACTGGTTCCACCCTCAGTGGCAGACAATGTGACACAATATAGGATGACATCAGCTGCTGGAACATTTTGTTACATAGACCCTGAGTACCAACAGACAGGAATGCTGGGAGTGAAATCTGACATATACTCTCTTGGGATAATTTTCTTGCAAATTTTGACAGCAAGACCTCCAATGGGATTGACTCATCATGTTGAGAGAGCCATTGAAAAGGGAACATTTGTTGATATGTTGGATCCAAAAGTGCCTGATTGGCCAACAGAGGATGCTTTGATCTTTGCAAAGATTGCTGTGAGGTGTGCTGAACTGAGGAGGAGAGACAGACCTGATCTTGGCAAAGAAGTGTTGCCTGAACTAAATAGGTTAAGAGAACTTGCTGAGAGCCATGATCACTATCCAATGTATGGTGGCTATGTTAGCCCATCCAATCAAAGCCAAGTTTCTCTTCAATTGGATGAAGCCAATTCTCCACTTCCTTATTCTGGGGAGAGTTCAAAAAATGCATCAAGTCCTGGTTGA	2340	0.4325	MWLQKHHCDKKDGVNGIVAVAIDSDKGSQSALKWTIDHLLTKGSNVVLIHVKHKPSSLHPSVSLVNPRANGIGEHALVCKDPDEQTKEVFHPYRVFCARKDIHCKDTVIEDVDVAKALIEYASQYAIEHLVIGSSHKGGFLRFKITDVPGTVSKGAPDFCTVYVVAKGKIQSMRSASRAAPAFSPLQNLLTQPEPRLPLANNVKGLERRSFEAPPHVSHDGSDSFRSPFTRRGVNNDRYGEISVPETDISFVSSRRSSTDRLFPSMYTNNNHSETGISNPRLSYSSDIDGNNYSFESVHFGRRSMDISSDFSSFSQESEGLSSTTSQGMDDVEAEMRRLKQELEHTMEMYSNACKEALTAKQKTVELQRWKIEEERKIEKVRLAEEAALAIAEKEKLKSKAAMETAEAQKRIAELESQKRINAEMKAFRETEEKRKAVDALSNNCLRYRRYTIEAIEAATNFFTESQKIGEGGYGPVYKCFLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFCRGNVPPISWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVERAIEKGTFVDMLDPKVPDWPTEDALIFAKIAVRCAELRRRDRPDLGKEVLPELNRLRELAESHDHYPMYGGYVSPSNQSQVSLQLDEANSPLPYSGESSKNASSPG*	780

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac1g00831	779	Pfam	Protein kinase domain	463	694	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac1g00831	779	ProSiteProfiles	Protein kinase domain profile.	463	739	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac1g00831	779	SMART	serkin_6	463	723	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac1g00831	779	PANTHER	OS02G0152300 PROTEIN	18	747	-	-
	Phac1g00831	779	MobiDBLite	consensus disorder prediction	745	779	-	-
	Phac1g00831	779	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	165	-	-
	Phac1g00831	779	Coils	Coil	380	418	-	-
	Phac1g00831	779	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	581	593	IPR008271	GO:0004672\|GO:0006468
	Phac1g00831	779	SUPERFAMILY	Protein kinase-like (PK-like)	445	718	IPR011009	-
	Phac1g00831	779	MobiDBLite	consensus disorder prediction	212	232	-	-
	Phac1g00831	779	Gene3D	Phosphorylase Kinase; domain 1	442	535	-	-
	Phac1g00831	779	CDD	STK_N	17	168	-	-
	Phac1g00831	779	FunFam	U-box domain-containing protein 51	536	736	-	-
	Phac1g00831	779	Gene3D	HUPs	17	165	IPR014729	-
	Phac1g00831	779	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	435	535	-	-
	Phac1g00831	779	Coils	Coil	329	356	-	-
	Phac1g00831	779	Pfam	Universal stress protein family	18	163	IPR006016	-
	Phac1g00831	779	Gene3D	Transferase(Phosphotransferase) domain 1	536	741	-	-
	Phac1g00831	779	MobiDBLite	consensus disorder prediction	742	779	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g00831	Phac-Chr1	7058886	7064734	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g00831	1	756	Receptor kinase-like Gene Family	AT1G78940	54.872	0.0	777

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Phac1g00831		Pkinase	1.4e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g00831	-		-	gmx:100779981	1214.52