Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g00829 | ATGTCTCGCGTTTATGTTGGTAACTTGGATTCACGAGTGACCGAGAGGGATCTTGAAGACGAATTCCGTGTTTTCGGAGTCATTCGGAGTGTTTGGGTTGCAAGAAGGCCACCTGGTTATGCTTTTATTGACTTCGATGATAGGAGAGATGCTCAGGATGCTATTCGTGAATTGGATGGTATGAAGGGTTACGATTGTTTGATGTAA | 207 | 0.4396 | MSRVYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGMKGYDCLM* | 69 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g00829 | 68 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 4 | 64 | IPR000504 | GO:0003723 | |
Phac1g00829 | 68 | SMART | rrm1_1 | 3 | 68 | IPR000504 | GO:0003723 | |
Phac1g00829 | 68 | SUPERFAMILY | RNA-binding domain, RBD | 3 | 62 | IPR035979 | GO:0003676 | |
Phac1g00829 | 68 | Gene3D | - | 2 | 66 | IPR012677 | - | |
Phac1g00829 | 68 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 2 | 64 | - | - | |
Phac1g00829 | 68 | FunFam | Serine/arginine-rich splicing factor 7 | 2 | 67 | - | - | |
Phac1g00829 | 68 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 2 | 68 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g00829 | Phac-Chr1 | 7033252 | 7037158 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g00829 | 2 | 67 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 39.437 | 9.02e-09 | 47.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g00829 | K12896 | - | gmx:100796961 | 127.487 |