Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00817 ATGGCTGTGGAACTCATGGGGTTCCCCAAAATCGATGATCAAAAGGCTATCCAAGAGGCTGCATCGGAAGGCCTCAAGGGCATGGAACACCTGATCCGAATCCTCTCCCACCAACCCTCTCACTTGAACACTGACCTCACCGACGTTACCGTCTCCAAGTTCAAGAAACTCATCTCCCTCCTCAACCGAACCGGCCACGCTCGCTTCAGACGTGCTCCGGTTCAGGCCCCTCAACCGCTTCAAAACCCTCAGCCTGTTCAAACCCCCGCACCGGTTCACAATCCTCCCTCTGCACCTCTCCATCTTCCTCCCCCGCAAAGCGCCAACCTCTCCCTGCCGGCGCTCTTCGCGTCACCGGCGCCGGTTCACCATGCGCCGGGCAGCGTGACGCTCGACTTCACCAAGCCGCACAACGCGCTCCGGAACTCCAAGGCAAAGTCCGTGGAGCTCGAGTTCTCGAAGGAGACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTTCTCGCCCCGCCGCCGCCGCCTGCGACCTCCGCCGGAAAACCGCCGGCGTTCAAGAAACGCTGCCTCGAGCACCGCGAACACTCCGACGACGTGTCCGGATCCGGCAAGTGCCACTGCGTCAAGCGAAGGAAAAATAGGGTGAAGAAGACTGTGAGAGTGCCGGCGATAAGTTCAAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGTTCACCGTACCCTCGGGGGTATTACAAGTGCAGCACGGTGAGAGGGTGTCCCGCGAGGAAACACGTGGAGCGCGCACCAGACGATCCGGCGATGCTGATAGTGACGTACGAGGGGGAGCACAGGCACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGAGTGGTGGGTTTGGTGTTCGAGTCAACGTAG 978 0.6043 MAVELMGFPKIDDQKAIQEAASEGLKGMEHLIRILSHQPSHLNTDLTDVTVSKFKKLISLLNRTGHARFRRAPVQAPQPLQNPQPVQTPAPVHNPPSAPLHLPPPQSANLSLPALFASPAPVHHAPGSVTLDFTKPHNALRNSKAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKIFLAPPPPPATSAGKPPAFKKRCLEHREHSDDVSGSGKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00817 325 Pfam Plant zinc cluster domain 200 244 IPR018872 -
Phac1g00817 325 Gene3D WRKY domain 233 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00817 325 MobiDBLite consensus disorder prediction 75 106 - -
Phac1g00817 325 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00817 325 SUPERFAMILY WRKY DNA-binding domain 244 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00817 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 311 IPR044810 GO:0003700
Phac1g00817 325 Pfam WRKY DNA -binding domain 248 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00817 325 FunFam WRKY transcription factor 65 230 307 - -
Phac1g00817 325 MobiDBLite consensus disorder prediction 78 103 - -
Phac1g00817 325 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00817 Phac-Chr1 6930699 6933695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00817 1 324 WRKY Transcription Factor Family AT2G24570 60.756 6.11e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g00817 WRKY 8.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00817 - - pvu:PHAVU_001G060200g 584.334