Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00812 ATGGAAGGGACTCATGATGAGAAGAAGGAGGAAACCCTACCACCTGGATTTCGGTTTCACCCCACCGATGAAGAACTCATTTCTTACTACCTCACAAACAAGATTTCAGATTCTAATTTCACAGGAAAAGCCATAGCTGTTGTAGATCTCAACAAATGTGAACCATGGGATCTTCCGGGGAAGGCGAAGATGGGGCAAAAAGAATGGTACTTCTTCAACCTAAGGGATCGTAAGTATCCGACAGGTGTGAGAACGAATAGAGCAACGAAGACAGGGTACTGGAAAACCACAGGGAAAGACAAGGAGATATTGAACAGTGTTACATCGGAGTTGGTTGGTATGAAGAAGACTTTGGTTTTCTACAAAGGTAGGGCTCCCAGAGGAGAGAAAACCAACTGGGTCATGCATGAATATCGCATTCATTCAAAATCCACCTTCAAAATCGATAAGCAAGATGAATGGGTGGTTTGCCGGGTGTTCCGGAAGAGTGGTGGAGCAAGAAAGTTGCCATCAAATTCCAACCACACCAACACCAGAACACTCAATCCTTACAGTGTGGAAGTTGGCCCTAGCATTGTGCCACCCCCAATGATGCACCTGGGAGATCCTTCTGCTCATTTCAATTTTCCTTATGGATCAAGAAACCCTTCAGAGCTCTTCAGAGCTGGTGGATCCACAAGTGCCAATCTCATGAACCTCCCAATAATGCACCCCCATTTCAACAATGCAGCAGCAGCAGCAGAAGGTTTCACCATTTCTGGCCTCAATTTGAACCTGGGGGGTGCCACCACACAAACACAAACACAACCCTTTTTGAGGCCAATGATGCCACCACCACAGCCACTTTCTGTGGCCCAACTCAACCATGATTTCAGTTCCAACATGGTGACACACACTGCTCTTGCTGCTCACAGTGTAGGGTATGCTGCAGACATGGCCAATGCAAATTCTCACGGCAATAGGTACATTGGCATGGACCACTGCATGGATCTAGACAATTACTGGCCTTCCTACTAA 1017 0.4661 MEGTHDEKKEETLPPGFRFHPTDEELISYYLTNKISDSNFTGKAIAVVDLNKCEPWDLPGKAKMGQKEWYFFNLRDRKYPTGVRTNRATKTGYWKTTGKDKEILNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSTFKIDKQDEWVVCRVFRKSGGARKLPSNSNHTNTRTLNPYSVEVGPSIVPPPMMHLGDPSAHFNFPYGSRNPSELFRAGGSTSANLMNLPIMHPHFNNAAAAAEGFTISGLNLNLGGATTQTQTQPFLRPMMPPPQPLSVAQLNHDFSSNMVTHTALAAHSVGYAADMANANSHGNRYIGMDHCMDLDNYWPSY* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00812 338 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Phac1g00812 338 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
Phac1g00812 338 ProSiteProfiles NAC domain profile. 13 162 IPR003441 GO:0003677|GO:0006355
Phac1g00812 338 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 241 - -
Phac1g00812 338 FunFam NAC domain-containing protein 100-like 22 166 - -
Phac1g00812 338 Gene3D NAC domain 22 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00812 Phac-Chr1 6884531 6887755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00812 2 338 NAC Transcription Factor Family AT2G24430 51.240 1.58e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g00812 NAM 3.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00812 - - pvu:PHAVU_001G059900g 653.669