Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00797 ATGCCAGGTTTAACGTGCAACGCTTGTAACGCGGAATTCAAGGATGACACAGAGCAAAAGCTCCATTACAAGTCCGAGTGGCATCGCTATAATCTCAAGCGCAAGGTGGCTGGGGTTCCTGGGGTGACAGAAGCACTATTTCTGGCTAGGCAATCTGTTATTGCTCAAGAGAAAAATAAATTGAGTGAGACACCCATGCTCTATAGCTGTGGTCTTTGTGGAAAAGATTATAAAAGTTATAAAGCTCATGCTGAGCACCTTAAATCACGTGGTCATATGATGCGAGCCTCTGAAGGAACTAGTGGTGCTGATGAGAAGGCAATAATTAAGCCACTTCCACAACGTGTTGTGAATAGGCCTCCTCCTAGAAGAGAGGTGGATAACTCTGAAAATGAAGAAAGTGAAGATGAATGGGAGGAGGTTGATCCGGAAGATGATTTGGTCGATGGGGCTGCGAAGTCCTTGACTGATTTGAATGTGAGTGGGCATGGTGAAAATGTTGATATGGATGATGATGAAGATGACAATGATGAGGATGACTTTGAGGAGTTAGATCCCTCGTGTTGCTTTATGTGTGATCAAAAGCACAAAACAATTGAAGACTGCATGGTTCACATGCACAAGCATCACGGATTCTTCATTCCAGATGTTGAGTATTTGAAGGATCCAAAAGGCCTCCTCACATATCTTGGCCTTAAGGTCAAGAGGGACTACGAGTGTCTGTACTGCAATGAACGATGTTATCCTTTCAGCAGCTTGGAAGCAGTCAGGAAACATATGGCAGCAAAAAGCCATTGTAAAGTGCATTTTGGTGATGGTAATGAGGAGGAGGAGGTAGAGTTAGAAGAGTTCTATGACTACAGCAGCAGTTATACGGATGATCAGGGCAAGCAGCTCATTGTGTCTGGTGAAACAGCTAACAATGTAGAACTTGTTGGTGGCTCTGAGCTCATAATCACCAAGAAATCTGGTGATAAAATTTCAACCAGAACACTTGGTTCCCGTGAATTTTTGCGTTATTATCGTCAGAAGCCCCGGCCATCACCAAATAATATGGCCATTACTGCTGCATTAGCTTCAAGGTACAGGAGCATGGGTTTGACCACTGTCCAATCAAGGGAGCAAATTGTCAGGATGAAAGTGCTGAAGGAAATGAGTAGGTCAGGTGTGGAGAATATGCGTTCCAAGATAGCAATGAAGAGTAATGTTATCCGAAACCTGCCGAATAATGTCCCATATTAG 1242 0.4372 MPGLTCNACNAEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVIAQEKNKLSETPMLYSCGLCGKDYKSYKAHAEHLKSRGHMMRASEGTSGADEKAIIKPLPQRVVNRPPPRREVDNSENEESEDEWEEVDPEDDLVDGAAKSLTDLNVSGHGENVDMDDDEDDNDEDDFEELDPSCCFMCDQKHKTIEDCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYECLYCNERCYPFSSLEAVRKHMAAKSHCKVHFGDGNEEEEVELEEFYDYSSSYTDDQGKQLIVSGETANNVELVGGSELIITKKSGDKISTRTLGSREFLRYYRQKPRPSPNNMAITAALASRYRSMGLTTVQSREQIVRMKVLKEMSRSGVENMRSKIAMKSNVIRNLPNNVPY* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00797 413 SUPERFAMILY beta-beta-alpha zinc fingers 172 249 IPR036236 -
Phac1g00797 413 SMART c2h2final6 4 28 IPR013087 -
Phac1g00797 413 SMART c2h2final6 187 209 IPR013087 -
Phac1g00797 413 SMART c2h2final6 238 265 IPR013087 -
Phac1g00797 413 SMART c2h2final6 68 92 IPR013087 -
Phac1g00797 413 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Phac1g00797 413 Pfam C2H2 type zinc-finger (2 copies) 189 291 IPR041661 -
Phac1g00797 413 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Phac1g00797 413 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Phac1g00797 413 MobiDBLite consensus disorder prediction 130 146 - -
Phac1g00797 413 PANTHER ZINC FINGER PROTEIN 622 2 412 IPR040025 -
Phac1g00797 413 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Phac1g00797 413 MobiDBLite consensus disorder prediction 114 180 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00797 1 413 C2H2 Transcription Factor Family AT4G31420 65.789 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00797 K14816 - gmx:100809681 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00797 1 6671663 6675508 Phac1g00797 1 6671663 6675508 ECH