Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00746 ATGGATAAAGAGAATGCTGAAATAGGTGGTGGTGTGAGAGACTGTGGTCGAGTGACGCGAGCAATGGCTAGAGCTTTGAGAGAGGTCTCTGCCTCTTCGAGACCATGCTTTAAGAAACAACGCAAATTGGAGAAGAGCAGTAGAGCCGCTCTGACAGATGTAACCAATGAATACAGAAAACCGCAGCTCAATAACAGTGCTGCTTCCAATTTTCAGACAAGAGGAGGCCATAGGAAGCGAAACACAAAGGGAGCTTCCAATGTCTCCATGCAAGTTATGTCAACTCGAGATGTTCGAGCAAAGTCAGCAAAAGATTTATCCGCAGTATCGATGGTACAGTCACATGACGTTGTTTTTGCTGAAAGGCTGGAAGACAGAGAGCCAGTGCAACCTTCTATGTCTGTCCTGGCAGGTCCCCTGCTTTCAATGCAGGACTCTGTGAAATCTGATGAACTCCTGGGCTCTCCGAACAAAGAGAAACTAAAACATTCGGATGGTTTGGGCATTGTGGACATTGATTCAGTGGAGTTAAAGGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATATTTGTCAGAGAGTTTGAAAGGAGACTAACCGATTACATGGGCGAGCTGCAAAAAGATATCACTCCGAGCATGCGCGCAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTAGTTCCAGATACTCTTTACCTTACTGTGAATCTCATTGATCGGTTTCTTTCTCAAAGTTTGATTCAGAAACAGGGACTCCAGTTGCTGGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACACAAAGGCAGAGGTATTGAAAATGGAGAGTGAGGTTCTAAATCTGTTGCATTTTCAATTATCTGTTCCCACCGCTAAAACATTTCTCAGGAGGTTCATCCTAGCAGCACAATATTCTTGTAAGGTTTCTTGTGTTGAAGTGGAATTTCTGGCAAATTATTTAGCAGAACTCACTCTTGTTGAATACAGCTTCTCGCAGTTTCGACCTTCATTGATAGCTGCCTCTGCTGTATTAATAGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATTCAACTATGGAACACTATACAAATTACAGAGTGTCAGAACTTAAAACCACTGTCCTTGCACTGGCAGATTTGCAACTTAATACCAAAGGCTGTCCTCTGAGTGCTATACGTGACAAATATAAACAGCAGAAGTTCATGAGTGTGGCAAATTTGTCTCCAAAACCAGTGCAGTCACTTTTTGAGGCTGAAGTATAA 1353 0.4265 MDKENAEIGGGVRDCGRVTRAMARALREVSASSRPCFKKQRKLEKSSRAALTDVTNEYRKPQLNNSAASNFQTRGGHRKRNTKGASNVSMQVMSTRDVRAKSAKDLSAVSMVQSHDVVFAERLEDREPVQPSMSVLAGPLLSMQDSVKSDELLGSPNKEKLKHSDGLGIVDIDSVELKDPQVWSSYAPDIYNNIFVREFERRLTDYMGELQKDITPSMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSQSLIQKQGLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMESEVLNLLHFQLSVPTAKTFLRRFILAAQYSCKVSCVEVEFLANYLAELTLVEYSFSQFRPSLIAASAVLIARWTLNQSEHPWNSTMEHYTNYRVSELKTTVLALADLQLNTKGCPLSAIRDKYKQQKFMSVANLSPKPVQSLFEAEV* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00746 450 ProSitePatterns Cyclins signature. 219 250 IPR006671 -
Phac1g00746 450 PIRSF Cyclin_A_B_D_E 14 449 IPR046965 GO:0016538|GO:0044772
Phac1g00746 450 FunFam Cyclin A1 304 436 - -
Phac1g00746 450 SMART cyclin_7 321 409 IPR013763 -
Phac1g00746 450 SMART cyclin_7 224 308 IPR013763 -
Phac1g00746 450 CDD CYCLIN_AtCycA-like_rpt2 317 431 - -
Phac1g00746 450 PANTHER CYCLINS 148 428 IPR039361 -
Phac1g00746 450 MobiDBLite consensus disorder prediction 67 89 - -
Phac1g00746 450 Gene3D - 189 436 - -
Phac1g00746 450 Pfam Cyclin, N-terminal domain 189 315 IPR006671 -
Phac1g00746 450 Pfam Cyclin, C-terminal domain 317 439 IPR004367 -
Phac1g00746 450 Gene3D - 203 315 - -
Phac1g00746 450 FunFam Mitotic cyclin 6 203 302 - -
Phac1g00746 450 SUPERFAMILY Cyclin-like 178 314 IPR036915 -
Phac1g00746 450 SUPERFAMILY Cyclin-like 316 439 IPR036915 -
Phac1g00746 450 SMART Cyclin_C_2 317 440 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00746 Phac-Chr1 6131368 6138568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00746 3 446 Core Cell Cycle Gene Families AT5G25380 50.000 8.42e-140 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00746 K06627 - gmx:100777132 664.07