Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00743 ATGGATAAAGAGAATGCTGAAATAGGTGGTGGTGTGAGAGACTGTGGTCGAGTGACGCGAGCAATGGCTAGAGCTTTGAGAGAGGTCTCTGCCTCTTCGAGACCATGCTTTAAGAAACAACGCAAATTGGAGAAGAGCAGTAGAGCCGCTCTGACAGATGTAACCAATGAATACAGAAAACCGCAGCTCAATAACAGTGCTGCTTCCAATTTTCAGACAAGAGGAGGCCATAGGAAGCGAAACACAAAGGGAGCTTCCAATGTCTCCATGCAAGTTATGTCAACTCGAGATGTTCGAGCAAAGTCAGCAAAAGATTTATCCGCAGTATCGATGGTACAGTCACATGACGTTGTTTTTGCTGAAAGGCTGGAAGACAGAGAGCCAGTGCAACCTTCTATGTCTGTCCTGGCAGGTCCCCTGCTTTCAATGCAGGACTCTGTGAAATCTGATGAACTCCTGGGCTCTCCGAACAAAGATATTGATATGATTTCAGAGAAACTAAAACATTCGGATGGTTTGGGCATTGTGGACATTGATTCAGTGGAGTTAAAGGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATATTTGTCAGAGAGTTTGAAAGGAGACTAACCGATTACATGGGCGAGCTGCAAAAAGATATCACTCCGAGCATGCGCGCAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTAGTTCCAGATACTCTTTACCTTACTGTGAATCTCATTGATCGGTTTCTTTCTCAAAGTTTGATTCAGAAACAGGGACTCCAGTTGCTGGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACACAAAGGCAGAGGTATTGAAAATGGAGAGTGAGGTTCTAAATCTGTTGCATTTTCAATTATCTGTTCCCACCGCTAAAACATTTCTCAGGAGGTTCATCCTAGCAGCACAATATTCTTGTAAGGTTTCTTGTGTTGAAGTGGAATTTCTGGCAAATTATTTAGCAGAACTCACTCTTGTTGAATACAGCTTCTCGCAGTTTCGACCTTCATTGATAGCTGCCTCTGCTGTATTAATAGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATTCAACTATGGAACACTATACAAATTACAGAGTGTCAGAACTTAAAACCACTGTCCTTGCACTGGCAGATTTGCAACTTAATACCAAAGGCTGTCCTCTGAGTGCTATACGTGACAAATATAAACAGCAGAAGTTCATGAGTGTGGCAAATTTGTCTCCAAAACCAGTGCAGTCACTTTTTGAGGCTGAAGTATAA 1371 0.4238 MDKENAEIGGGVRDCGRVTRAMARALREVSASSRPCFKKQRKLEKSSRAALTDVTNEYRKPQLNNSAASNFQTRGGHRKRNTKGASNVSMQVMSTRDVRAKSAKDLSAVSMVQSHDVVFAERLEDREPVQPSMSVLAGPLLSMQDSVKSDELLGSPNKDIDMISEKLKHSDGLGIVDIDSVELKDPQVWSSYAPDIYNNIFVREFERRLTDYMGELQKDITPSMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSQSLIQKQGLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMESEVLNLLHFQLSVPTAKTFLRRFILAAQYSCKVSCVEVEFLANYLAELTLVEYSFSQFRPSLIAASAVLIARWTLNQSEHPWNSTMEHYTNYRVSELKTTVLALADLQLNTKGCPLSAIRDKYKQQKFMSVANLSPKPVQSLFEAEV* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00743 456 PIRSF Cyclin_A_B_D_E 15 455 IPR046965 GO:0016538|GO:0044772
Phac1g00743 456 FunFam Cyclin A1 310 442 - -
Phac1g00743 456 Pfam Cyclin, C-terminal domain 323 445 IPR004367 -
Phac1g00743 456 Gene3D - 195 442 - -
Phac1g00743 456 PANTHER CYCLINS 150 434 IPR039361 -
Phac1g00743 456 FunFam Mitotic cyclin 6 209 308 - -
Phac1g00743 456 SMART cyclin_7 327 415 IPR013763 -
Phac1g00743 456 SMART cyclin_7 230 314 IPR013763 -
Phac1g00743 456 SUPERFAMILY Cyclin-like 322 445 IPR036915 -
Phac1g00743 456 SMART Cyclin_C_2 323 446 IPR004367 -
Phac1g00743 456 MobiDBLite consensus disorder prediction 67 89 - -
Phac1g00743 456 Gene3D - 209 321 - -
Phac1g00743 456 Pfam Cyclin, N-terminal domain 195 321 IPR006671 -
Phac1g00743 456 CDD CYCLIN_AtCycA-like_rpt2 323 437 - -
Phac1g00743 456 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
Phac1g00743 456 SUPERFAMILY Cyclin-like 184 320 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00743 Phac-Chr1 6131368 6138568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00743 3 452 Core Cell Cycle Gene Families AT5G25380 49.576 7.71e-138 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00743 K06627 - gmx:100777132 680.633