Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00723 ATGCTTAGATGTGTTTCGACCATAATGGTGTACTGCAGTCACTGTGCCAAAAATGTAGCTGGGGAGCGACTAGATGACGGTTTCTTATGTTGTGGAAGTTGTGGGAGGGTGTTGGAAGATTACTTTTTTGCTGAGGAGCCTACATTTGTCAAGAATGCGGCAGGGCAGAGTAAATTATCAGGTAATTATGTAAGAACAGTTCAAAGCGAGTTCTCTGAGTCACGTCAAAGGACTTTAGATAGAGCTTATGATGAAATTAAATATCTAAGTATGGGCCTTGGAGTTCATGATGAACATATGGCTGACCAAGCATTGACCTTTTATAAAATAGCGCTTGAGCGAAATTTCACCCGTGGACGTAAATCAGAGCAAGTACAGGCTGCTTGTCTCTATATTGCATTTCGTTATGTGCTAGGATCAGTTTTCTTGCAGCTTTGTGAAGTGTTGAGGCTTGGAGAGCACCCAATTGTTCAAAAGCCTGTTGATCCTAGTCTTTTTATTCATAGATATACTAAAAATTTGATTAAGCGAGGGAGTAAGGCAGTATCTGATACTGCACTGACCATTGTTGCAAGCATGAAACGGGACTGGATGCAGACAGGTAGGAAACCTAGTGGTCTATGCGGTGCGGCAATATACATTTCTGCTCTTGCACATGGAATTAAATGCTCTAAACCCGATATTATGCTCTGTGGTCTCCCTTCTGATATATGTTCCATTCTTAGAATCGTCCATGTGTGTGAAGCAACATTGACCAAACGATTGGTTGAATTTGAAAATACGGAATGTTCTAGCTTGACAGTTGAGGAGTTGGATACCATGGCAAAGGAGCATGAAAAAAATCCAACGGTAATGGCAGAAGATGAATTGAAAGGGTGTATTTCAAAAGATCTACTATGTGAGCACAAGGATAGTGGGGCGTCCCATTTTGCTCTTGGATTGTGCGAAGCATGCTATAAGGATTTCGATAAGCTCTCTGGTGGACTTGGTGGTGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGCGGGAAAGAATGAAAAGAGCACTTCTCAAAGAGAGTGTTGATGAAGCATGTGATTTAGCGAATGCATCAAATGATCAGTTTAAGAGCCACCCAGAAGATTTGCCTGCCTGTGTGCCAGAAGATGGTAAATATGAATATGGTGATTCATTTAGAGAAGATGAATCAGAAACTTTATCTGATATTGATGATGAAGACGTTGATTTATACATTCATGATGAGGAGGGGAGACATATCAAGAAGATACTATGGGAAGCAGCAAATCGGGAGTATCTTGAGGAGCAAGCAGCCAAGGAAGCAATTGCAGCAGCTAATAAGAAAGCTTTTGAGGCAAATTTTGAGAACTGTTCAGAGGATTTACTTGCAGCAAGAGAGCTTGCTGCATCTGCTTCTGAGGCCGTGGCAAAATCCAGAAAGTTTCTGTTCTTGTTAAGTGATAGATTGTCATTGCTGCAGTGCTAA 1485 0.4168 MLRCVSTIMVYCSHCAKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPTFVKNAAGQSKLSGNYVRTVQSEFSESRQRTLDRAYDEIKYLSMGLGVHDEHMADQALTFYKIALERNFTRGRKSEQVQAACLYIAFRYVLGSVFLQLCEVLRLGEHPIVQKPVDPSLFIHRYTKNLIKRGSKAVSDTALTIVASMKRDWMQTGRKPSGLCGAAIYISALAHGIKCSKPDIMLCGLPSDICSILRIVHVCEATLTKRLVEFENTECSSLTVEELDTMAKEHEKNPTVMAEDELKGCISKDLLCEHKDSGASHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERMKRALLKESVDEACDLANASNDQFKSHPEDLPACVPEDGKYEYGDSFREDESETLSDIDDEDVDLYIHDEEGRHIKKILWEAANREYLEEQAAKEAIAAANKKAFEANFENCSEDLLAARELAASASEAVAKSRKFLFLLSDRLSLLQC* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00723 494 Gene3D - 10 153 - -
Phac1g00723 494 Gene3D Single helix bin 373 442 - -
Phac1g00723 494 CDD CYCLIN_TFIIIB90_rpt2 159 261 - -
Phac1g00723 494 Pfam Brf1-like TBP-binding domain 401 452 IPR011665 -
Phac1g00723 494 Pfam Transcription factor TFIIB repeat 158 260 IPR013150 GO:0017025
Phac1g00723 494 Pfam Transcription factor TFIIB repeat 76 135 IPR013150 GO:0017025
Phac1g00723 494 Gene3D - 162 264 - -
Phac1g00723 494 SUPERFAMILY Zinc beta-ribbon 4 51 - -
Phac1g00723 494 FunFam Transcription factor IIIB subunit 162 263 - -
Phac1g00723 494 SUPERFAMILY Cyclin-like 161 263 IPR036915 -
Phac1g00723 494 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 10 433 IPR000812 GO:0006352|GO:0070897
Phac1g00723 494 SUPERFAMILY Cyclin-like 82 149 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00723 Phac-Chr1 5827640 5838828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00723 9 480 Inorganic Solute Cotransporters AT2G01280 43.121 5.62e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00723 K15196 - gmx:100817609 753.436