Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00720 ATGTTGAGAGAGAGAAAGGGTTTACATGAAGATATGATGATGGTACTGTGTGTGATGTTAACATATAATTGCAGAATATGGACCAAGTTTCTGCTAATATTGGTGTTCTACACAGCTTGGATATGTCCATTTGAATTTGGTTTCCTTGAAAAATCAAAGGGTGCACTAGCTGTAACCGACAATGTTGTAAACGGGTTTTTTGCCATTGACATTGTTCTCACCTTCTTCGTTGCTTACCTTGATAAGTCTACTTATCTATTAGTTGATAACCACAAACTCATTGCTTTGAGATATGCTAAATCTTGGTTGATTTTGGATGTCATTGCTTGTGTTCCATATGAAGTTGTTCGTAGTTTGTTGCCACCTCCTCTTCAGTTCTATAGTTACTTGAATATTCTCCGACTTTGGCGTCTCCATCGAGTTAGTGCCATGTTTGCAAGATTGGAAAAGGACAGAAATTATAGCTACTTTTGGGTGCGCTGTTGCAAGCTTACATGTGTTACTCTATTCGCAGTGCATGCTGCTGCATGCTTTTTCTTTTTTCTTGCTGCACGAGATGATCCACAAAATACATGGCTTGGACTTGTTCCTAAGGCCATCGACCAAAATATATGGGGAAAATATGTAGTAGCTGTATATTGGTCCATAGTCACCCTTGTATCAGTTGGTTATGGTGATCTACATCCTGTAAATACAAAAGAAATGGTATTTAGCATTTTGTATATGCTCTTTAATCTTGGACTCACCTCATACTTGATAGGCAACATGACCAACATGGTTGTCCACTGGACTGAAAGAACTAAGAGATATAGAGACACTGTCCAATCTGCTTCAAATTTTGCCCATAGGAATCGCTTGCCTATTCGTTTGCAAGAACAAATATTTGCTCATTTGCTTATGAGGTATAGAACTGATTTAGAAGGACTACAACAACAAGAGATCATTGATTCCCTTCCAAAAGCCATTCACTCTAGCATCTCACACTACCTATTCTTTTCACTTATTGACAAAGTGTACTTATTCCATGGAGTGTCAAATGACCTACTTTTTCAACTGGTATCAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTACAAAATGAAGCACCAACAGACTTTTATATATTCATTACAGGATCTGCTGATCTTATCACTCAAACGAATGGAATAGAACAGATTGTTGGAGAAGTAAGGCCAGGAGATGTAGTTGGTGAAATAGGAGTCTTATGTTATAAGCCACAATTGTTCACAGTCCGGACCAAGAGATTGAGCCAGATCTTACGTTTGAATCGAACCACATTTCTAAATCTTACTCATTCAAATGTTGGAGATGGAACAATGATCATAAACAATTTTCTTCATCATTTACATGAACAAGGGAATCCACTAATGGAAGAAATTTTGGCAGAGGCAGAAGCAATGTTGGCTAGGGGCAAAATGGATTTGCCAATTAGTTTATTGTTTGCAGCAAGTAGAGGTGATGATATTTTGTTGAATCAATTGTTAAAGAAGGGTTCAGATCCAAATGAACCAGATAAGAAAGGAAAGACAGCAATGCATATTGCAGCTTGCAAAGGCAATAAACATTGTGTAATTGTGCTTCTAGAGCATGGAGCAAATCCCAACATCAAAGACATGGAAGGAAATTCGCCACTATGGGAAGCAATTAAGGGTGGACATGAAACTGTGATGAAAGTTCTTGTAGAAAATGGTGCAGAAATATCATCTAATAATGTAGTTGATTATGCAAGATTGGCCATTGAGAAAAACAACTTAGAAATTCTGAAGGAGATTATTCAACGTGGTGGGGATGTGACACAATGTAGTGACAAAATGACCACACTGCTCCATGCTGCAGTGTGTGAGGGAAATTCTGAAATAGTGAAGTACCTTATAGAGCTAGGAGCAGACATTGATAGAGAAGATAGTGTTGGGTTAACTGCAAGATCTTTAGCAGAACATCAATGTCATGAAGAAATACTAAACATATTTAACACAATTGGACACAACAATGAAACAAATGGTATTCCTCAAATTTCAACCTTTGTTGGTAGGTGTCAAAGTGAACCCACAATACCAGCCATTCCCCTACCCATCAAACCACCTAATAAAGAACTCACATGGTTTGATAATCATCAAAGAAGAAGGGTCAGCCCTTTCCACAATTCCTTTTTTGGAATCATGTCATCTGCAAATTATGGTAAAAGAGATTCAACATCATCTCAAACCAGTCAAAGTATTAAAGAGGAAGTGGCACCAAGAATAACACTTAGTTGTCCAGAGAAAGGTAAAGATGCAAAGAAGCTTCTGTTTTTGCCAGATTCCATAAACGAATTGCTTCGTGTTGGTGCTAAAAAGTTCAATTGCTCTCCCTCCAAAATATTGACCATAGAAGGAGCTCAAATTGATGACATAGATGTTATAAGAGATGGTGATCATCTTCTTCTTGTATAG 2466 0.3767 MLRERKGLHEDMMMVLCVMLTYNCRIWTKFLLILVFYTAWICPFEFGFLEKSKGALAVTDNVVNGFFAIDIVLTFFVAYLDKSTYLLVDNHKLIALRYAKSWLILDVIACVPYEVVRSLLPPPLQFYSYLNILRLWRLHRVSAMFARLEKDRNYSYFWVRCCKLTCVTLFAVHAAACFFFFLAARDDPQNTWLGLVPKAIDQNIWGKYVVAVYWSIVTLVSVGYGDLHPVNTKEMVFSILYMLFNLGLTSYLIGNMTNMVVHWTERTKRYRDTVQSASNFAHRNRLPIRLQEQIFAHLLMRYRTDLEGLQQQEIIDSLPKAIHSSISHYLFFSLIDKVYLFHGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYIFITGSADLITQTNGIEQIVGEVRPGDVVGEIGVLCYKPQLFTVRTKRLSQILRLNRTTFLNLTHSNVGDGTMIINNFLHHLHEQGNPLMEEILAEAEAMLARGKMDLPISLLFAASRGDDILLNQLLKKGSDPNEPDKKGKTAMHIAACKGNKHCVIVLLEHGANPNIKDMEGNSPLWEAIKGGHETVMKVLVENGAEISSNNVVDYARLAIEKNNLEILKEIIQRGGDVTQCSDKMTTLLHAAVCEGNSEIVKYLIELGADIDREDSVGLTARSLAEHQCHEEILNIFNTIGHNNETNGIPQISTFVGRCQSEPTIPAIPLPIKPPNKELTWFDNHQRRRVSPFHNSFFGIMSSANYGKRDSTSSQTSQSIKEEVAPRITLSCPEKGKDAKKLLFLPDSINELLRVGAKKFNCSPSKILTIEGAQIDDIDVIRDGDHLLLV* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00720 821 ProSiteProfiles Ankyrin repeat region circular profile. 518 549 - -
Phac1g00720 821 ProSiteProfiles Ankyrin repeat region circular profile. 615 646 - -
Phac1g00720 821 ProSiteProfiles KHA domain profile. 758 821 IPR021789 -
Phac1g00720 821 PANTHER POTASSIUM CHANNEL AKT1 21 820 IPR045319 GO:0005249|GO:0006813
Phac1g00720 821 PRINTS Ankyrin repeat signature 631 645 IPR002110 GO:0005515
Phac1g00720 821 PRINTS Ankyrin repeat signature 519 534 IPR002110 GO:0005515
Phac1g00720 821 Gene3D Jelly Rolls 306 465 IPR014710 -
Phac1g00720 821 SMART cnmp_10 340 457 IPR000595 -
Phac1g00720 821 Pfam KHA, dimerisation domain of potassium ion channel 758 820 IPR021789 -
Phac1g00720 821 FunFam Potassium channel KAT3 26 262 - -
Phac1g00720 821 Gene3D - 486 670 IPR036770 -
Phac1g00720 821 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Phac1g00720 821 PRINTS EAG/ELK/ERG potassium channel family signature 208 225 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00720 821 PRINTS EAG/ELK/ERG potassium channel family signature 234 245 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00720 821 PRINTS EAG/ELK/ERG potassium channel family signature 37 44 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00720 821 PRINTS EAG/ELK/ERG potassium channel family signature 252 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00720 821 PRINTS EAG/ELK/ERG potassium channel family signature 60 70 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00720 821 PRINTS EAG/ELK/ERG potassium channel family signature 71 80 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00720 821 Gene3D - 27 261 - -
Phac1g00720 821 SMART ANK_2a 518 547 IPR002110 GO:0005515
Phac1g00720 821 SMART ANK_2a 485 514 IPR002110 GO:0005515
Phac1g00720 821 SMART ANK_2a 582 611 IPR002110 GO:0005515
Phac1g00720 821 SMART ANK_2a 551 580 IPR002110 GO:0005515
Phac1g00720 821 SMART ANK_2a 615 644 IPR002110 GO:0005515
Phac1g00720 821 Pfam Cyclic nucleotide-binding domain 360 444 IPR000595 -
Phac1g00720 821 SUPERFAMILY Ankyrin repeat 451 672 IPR036770 -
Phac1g00720 821 ProSiteProfiles Ankyrin repeat profile. 518 550 IPR002110 GO:0005515
Phac1g00720 821 ProSiteProfiles cAMP/cGMP binding motif profile. 340 459 IPR000595 -
Phac1g00720 821 ProSiteProfiles Ankyrin repeat profile. 615 647 IPR002110 GO:0005515
Phac1g00720 821 Pfam Ion transport protein 25 267 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac1g00720 821 Pfam Ankyrin repeats (3 copies) 589 646 IPR002110 GO:0005515
Phac1g00720 821 Pfam Ankyrin repeats (3 copies) 490 581 IPR002110 GO:0005515
Phac1g00720 821 FunFam Potassium channel KAT2 328 464 - -
Phac1g00720 821 SUPERFAMILY Voltage-gated potassium channels 25 261 - -
Phac1g00720 821 CDD CAP_ED 340 445 IPR000595 -
Phac1g00720 821 SUPERFAMILY cAMP-binding domain-like 265 460 IPR018490 -
Phac1g00720 821 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00720 Phac-Chr1 5786931 5794193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00720 25 820 Ion Channels AT2G25600 57.002 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00720 K21867 - gmx:100809960 1264.6