Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00719 ATGTCATCATCAAGCCGAAGAAGGAAGACGAAGAATATGTTTGGAATATGTTGTGGTGATGACGTGAACGATGTAAATGAGAAAGAGATTGAGGCAAGAGAAGATGGCAGCCAATACAGTCTCACAGGTGTTCTTCTTCCTTCTCTCGGTGCCACTGCCATCAACAACGGGAGTCGCAGACCAGTTCTTCATCGCAACATCATCTCCCCATATAATCGTCGTTACAGAATATGGACCAAGTTTCTGCTAATATTGGTGTTCTACACAGCTTGGATATGTCCATTTGAATTTGGTTTCCTTGAAAAATCAAAGGGTGCACTAGCTGTAACCGACAATGTTGTAAACGGGTTTTTTGCCATTGACATTGTTCTCACCTTCTTCGTTGCTTACCTTGATAAGTCTACTTATCTATTAGTTGATAACCACAAACTCATTGCTTTGAGATATGCTAAATCTTGGTTGATTTTGGATGTCATTGCTTGTGTTCCATATGAAGTTGTTCGTAGTTTGTTGCCACCTCCTCTTCAGTTCTATAGTTACTTGAATATTCTCCGACTTTGGCGTCTCCATCGAGTTAGTGCCATGTTTGCAAGATTGGAAAAGGACAGAAATTATAGCTACTTTTGGGTGCGCTGTTGCAAGCTTACATGTGTTACTCTATTCGCAGTGCATGCTGCTGCATGCTTTTTCTTTTTTCTTGCTGCACGAGATGATCCACAAAATACATGGCTTGGACTTGTTCCTAAGGCCATCGACCAAAATATATGGGGAAAATATGTAGTAGCTGTATATTGGTCCATAGTCACCCTTGTATCAGTTGGTTATGGTGATCTACATCCTGTAAATACAAAAGAAATGGTATTTAGCATTTTGTATATGCTCTTTAATCTTGGACTCACCTCATACTTGATAGGCAACATGACCAACATGGTTGTCCACTGGACTGAAAGAACTAAGAGATATAGAGACACTGTCCAATCTGCTTCAAATTTTGCCCATAGGAATCGCTTGCCTATTCGTTTGCAAGAACAAATATTTGCTCATTTGCTTATGAGGTATAGAACTGATTTAGAAGGACTACAACAACAAGAGATCATTGATTCCCTTCCAAAAGCCATTCACTCTAGCATCTCACACTACCTATTCTTTTCACTTATTGACAAAGTGTACTTATTCCATGGAGTGTCAAATGACCTACTTTTTCAACTGGTATCAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTACAAAATGAAGCACCAACAGACTTTTATATATTCATTACAGGATCTGCTGATCTTATCACTCAAACGAATGGAATAGAACAGATTGTTGGAGAAGTAAGGCCAGGAGATGTAGTTGGTGAAATAGGAGTCTTATGTTATAAGCCACAATTGTTCACAGTCCGGACCAAGAGATTGAGCCAGATCTTACGTTTGAATCGAACCACATTTCTAAATCTTACTCATTCAAATGTTGGAGATGGAACAATGATCATAAACAATTTTCTTCATCATTTACATGAACAAGGGAATCCACTAATGGAAGAAATTTTGGCAGAGGCAGAAGCAATGTTGGCTAGGGGCAAAATGGATTTGCCAATTAGTTTATTGTTTGCAGCAAGTAGAGGTGATGATATTTTGTTGAATCAATTGTTAAAGAAGGGTTCAGATCCAAATGAACCAGATAAGAAAGGAAAGACAGCAATGCATATTGCAGCTTGCAAAGGCAATAAACATTGTGTAATTGTGCTTCTAGAGCATGGAGCAAATCCCAACATCAAAGACATGGAAGGAAATTCGCCACTATGGGAAGCAATTAAGGGTGGACATGAAACTGTGATGAAAGTTCTTGTAGAAAATGGTGCAGAAATATCATCTAATAATGTAGTTGATTATGCAAGATTGGCCATTGAGAAAAACAACTTAGAAATTCTGAAGGAGATTATTCAACGTGGTGGGGATGTGACACAATGTAGTGACAAAATGACCACACTGCTCCATGCTGCAGTGTGTGAGGGAAATTCTGAAATAGTGAAGTACCTTATAGAGCTAGGAGCAGACATTGATAGAGAAGATAGTGTTGGGTTAACTGCAAGATCTTTAGCAGAACATCAATGTCATGAAGAAATACTAAACATATTTAACACAATTGGACACAACAATGAAACAAATGGTATTCCTCAAATTTCAACCTTTGTTGGTAGGTGTCAAAGTGAACCCACAATACCAGCCATTCCCCTACCCATCAAACCACCTAATAAAGAACTCACATGGTTTGATAATCATCAAAGAAGAAGGGTCAGCCCTTTCCACAATTCCTTTTTTGGAATCATGTCATCTGCAAATTATGGTAAAAGAGATTCAACATCATCTCAAACCAGTCAAAGTATTAAAGAGGAAGTGGCACCAAGAATAACACTTAGTTGTCCAGAGAAAGGTAAAGATGCAAAGAAGCTTCTGTTTTTGCCAGATTCCATAAACGAATTGCTTCGTGTTGGTGCTAAAAAGTTCAATTGCTCTCCCTCCAAAATATTGACCATAGAAGGAGCTCAAATTGATGACATAGATGTTATAAGAGATGGTGATCATCTTCTTCTTGTATAG 2619 0.3841 MSSSSRRRKTKNMFGICCGDDVNDVNEKEIEAREDGSQYSLTGVLLPSLGATAINNGSRRPVLHRNIISPYNRRYRIWTKFLLILVFYTAWICPFEFGFLEKSKGALAVTDNVVNGFFAIDIVLTFFVAYLDKSTYLLVDNHKLIALRYAKSWLILDVIACVPYEVVRSLLPPPLQFYSYLNILRLWRLHRVSAMFARLEKDRNYSYFWVRCCKLTCVTLFAVHAAACFFFFLAARDDPQNTWLGLVPKAIDQNIWGKYVVAVYWSIVTLVSVGYGDLHPVNTKEMVFSILYMLFNLGLTSYLIGNMTNMVVHWTERTKRYRDTVQSASNFAHRNRLPIRLQEQIFAHLLMRYRTDLEGLQQQEIIDSLPKAIHSSISHYLFFSLIDKVYLFHGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYIFITGSADLITQTNGIEQIVGEVRPGDVVGEIGVLCYKPQLFTVRTKRLSQILRLNRTTFLNLTHSNVGDGTMIINNFLHHLHEQGNPLMEEILAEAEAMLARGKMDLPISLLFAASRGDDILLNQLLKKGSDPNEPDKKGKTAMHIAACKGNKHCVIVLLEHGANPNIKDMEGNSPLWEAIKGGHETVMKVLVENGAEISSNNVVDYARLAIEKNNLEILKEIIQRGGDVTQCSDKMTTLLHAAVCEGNSEIVKYLIELGADIDREDSVGLTARSLAEHQCHEEILNIFNTIGHNNETNGIPQISTFVGRCQSEPTIPAIPLPIKPPNKELTWFDNHQRRRVSPFHNSFFGIMSSANYGKRDSTSSQTSQSIKEEVAPRITLSCPEKGKDAKKLLFLPDSINELLRVGAKKFNCSPSKILTIEGAQIDDIDVIRDGDHLLLV* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00719 872 ProSiteProfiles Ankyrin repeat region circular profile. 569 600 - -
Phac1g00719 872 SUPERFAMILY cAMP-binding domain-like 316 511 IPR018490 -
Phac1g00719 872 Pfam Ion transport protein 76 318 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac1g00719 872 ProSiteProfiles Ankyrin repeat region circular profile. 666 697 - -
Phac1g00719 872 PANTHER POTASSIUM CHANNEL AKT1 37 871 IPR045319 GO:0005249|GO:0006813
Phac1g00719 872 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Phac1g00719 872 ProSiteProfiles Ankyrin repeat region circular profile. 602 633 - -
Phac1g00719 872 Pfam KHA, dimerisation domain of potassium ion channel 809 871 IPR021789 -
Phac1g00719 872 SMART ANK_2a 536 565 IPR002110 GO:0005515
Phac1g00719 872 SMART ANK_2a 633 662 IPR002110 GO:0005515
Phac1g00719 872 SMART ANK_2a 666 695 IPR002110 GO:0005515
Phac1g00719 872 SMART ANK_2a 569 598 IPR002110 GO:0005515
Phac1g00719 872 SMART ANK_2a 602 631 IPR002110 GO:0005515
Phac1g00719 872 SMART cnmp_10 391 508 IPR000595 -
Phac1g00719 872 ProSiteProfiles KHA domain profile. 809 872 IPR021789 -
Phac1g00719 872 SUPERFAMILY Voltage-gated potassium channels 70 312 - -
Phac1g00719 872 ProSiteProfiles Ankyrin repeat profile. 569 601 IPR002110 GO:0005515
Phac1g00719 872 SUPERFAMILY Ankyrin repeat 502 723 IPR036770 -
Phac1g00719 872 PRINTS Ankyrin repeat signature 682 696 IPR002110 GO:0005515
Phac1g00719 872 PRINTS Ankyrin repeat signature 570 585 IPR002110 GO:0005515
Phac1g00719 872 Pfam Ankyrin repeats (3 copies) 541 632 IPR002110 GO:0005515
Phac1g00719 872 Pfam Ankyrin repeats (3 copies) 640 697 IPR002110 GO:0005515
Phac1g00719 872 Gene3D Jelly Rolls 357 516 IPR014710 -
Phac1g00719 872 ProSiteProfiles Ankyrin repeat profile. 666 698 IPR002110 GO:0005515
Phac1g00719 872 Pfam Cyclic nucleotide-binding domain 411 495 IPR000595 -
Phac1g00719 872 Gene3D - 78 312 - -
Phac1g00719 872 FunFam Potassium channel KAT3 77 313 - -
Phac1g00719 872 Gene3D - 537 721 IPR036770 -
Phac1g00719 872 ProSiteProfiles cAMP/cGMP binding motif profile. 391 510 IPR000595 -
Phac1g00719 872 FunFam Potassium channel KAT2 379 515 - -
Phac1g00719 872 CDD CAP_ED 391 496 IPR000595 -
Phac1g00719 872 PRINTS EAG/ELK/ERG potassium channel family signature 111 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00719 872 PRINTS EAG/ELK/ERG potassium channel family signature 88 95 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00719 872 PRINTS EAG/ELK/ERG potassium channel family signature 259 276 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00719 872 PRINTS EAG/ELK/ERG potassium channel family signature 285 296 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00719 872 PRINTS EAG/ELK/ERG potassium channel family signature 303 312 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac1g00719 872 PRINTS EAG/ELK/ERG potassium channel family signature 122 131 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00719 Phac-Chr1 5785976 5794193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00719 20 871 Ion Channels AT2G25600 56.422 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00719 K21867 - gmx:100808832 1351.65