Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00714 ATGCTGCACATGTTGTATACTACATCCTTCTACACTCCCACTTCACATTGTCCTGTGTGTTTTGCAGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCTCCTAGGTTAAAGCATGATGCTCCAGGTCTTCTTTCCATGCCAGTTGCTGATCGTGACAGTCTTGGTTCTCATTTTATCATCACTTTTAAATCTGATCCACATCTTGATAGGAAACATGTAATCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGGAAAGAAGATAAATAAGTCAAAAAAGGGAAGAGATGGATCTACTGAAACCCATAGTCCTGAACTGCATAGGGGAAAGCACAAAAAATCTTCAGGGGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCAAATAGTTCCTCAGATTCAGACACGAAATCTTCAGAAAGTGATAGTGATTCTGACTCAGATACATCCTCATCTTACACAAGTTCCTCCAGTGATGACAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGAAAAAGAAGAGACCAACACCGGGACAAGAGACGAAGGAAACAAGACAAAAGATCAAAACGGAAATCAAGAAGGGAATTGACCTGTCATACTGAGTCAGATAGTGATAATAAGAGTGGCAACAGCTCTGGTGGTGAAAGTTGTGATGCTCAAGCAAAAGATCAGAAGCATAAAGATCATTCTCAGAAACATGCTGAAGGTCAGTCTTCCTTGGTTGTGGAGAAAGAATTACCTGCCGCGCTCCTTTCAAAGGGGGAGAAACTGGATATGCTGGAGGAGGAAAAATTCCCAAAGGTAAATGGAGAGCGGCGTAGCAATGGCAATGAAGCCAACTATAGATCTGAGAGAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAGGCAAATCTAGGAGTCAAAGCATGAGTATTAGTCCAAAGCGTGAGAGCAGAAGTACAAGCATTAGTCGAAAAAAGAGGTTGAGCAGAAGTCCAAGTGGTAGTAGAAGCCCTCGTGCTCCATTACGGAGGAGTTTGAGCAGGAGTCCAAACAGAAGAAGCATCAGCAGAAGCCCGGTGAGAGGTAGAAAGGGGAAAAGCGTCAGTAGAAGCCCTATGCAATCTCGTGGATATAGAAGTGTCAGTGTAAGCCCTGATAGATCCCTTTCTCGGAGCAACCAGAGGACATCACCCAGAGCACCATCACGAAGATCGATCAGCAGAAGCCCTGTGATTAATCACAATCATAGAAGTGTCAGTAGAAGCCCTATTAGATCTCGTGATCATAGAAGTGTCAGTGTAAGCCCTGTGAGATCCCTTTCCCGGAGCCACAAGAGTTCACCCAGAGCACGATCACAAAGATCAATCAGCAGAAGCCCTGTGAGAACACACAATCATAGGAGTGTCAATAGAAGCCCTGTGAGATCTAGTGGTCGGAGAAGTGTCAGTGCAAGCCCAGTAAGACCCCTTTCTCGGAGTCGTAGGAGGAGTTCACCCAGGGCACCATCTAGAAGATCAATCAGTAGAAGCCCAGTGAAAACTGGAAATGTAAGTAGAAGCCCTGTGAGATCTCATGGTCATAGAAGTGTGAGTGCAAGCCCTGTAAGATCGCTTTCTCGGGGCCGTTGGAGGAATTCACCCAGAGCACAATCAAGAAAATCAATCAGCAGAAGCCCGGTAAGAGTGTCCAGAAAGAGTTTAAGCAGGAGTCCAGTTAGAACATCTGCCAGAAGCTTGAGCAGAAGTTTGAGCAGAAGCTCTGGCAGAGTCCCTTTAAGAAGCATTAGCCGAAGTCCAGCTAGAGTGCCAAGCAGAGGCAATCGTCGCAGTTATTCTAGAAGTCCTCGTGGTAGGAGCCTGTCAAGAAGTGTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACAGTACTCTTACGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGGTCGTACCGCTATAATGGAAGAAGTTACCGTGACAGATATTCAGGTTACAGGAGGTACTCCCCAAGGCGTAATAGGAGCCCACTGCCACGTAGGAGAACTCCACCAAGGTTCCGGAGGAGGAGGAGCAGGACACCGTCTGTATCACGCAGCCCACGGTATCGAGGTCGACGATATAGTCGAAGCCGAAGCCGTAGCCCTGTTCGCAGCCGTAGCCCTGTTCGCAGTCGTACACCTGTTGGTGCATATCGATCTCGTGCTGAGAAGAGTAGGTCTTTGTCCCGGAGTAGAAGTCTATCACGATCTAGGGCGTCAGTGGAATCACAATCTCCACAAAAGGCGAGCAGGAACAGCAGGTCAGCGTCCCCTTCTGAAAGCCCAGATGCAAAGAAAGGCCTTGTATCTTACGAAGATGGTTCTCCTTATTCAAACTAA 2520 0.4631 MLHMLYTTSFYTPTSHCPVCFAGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDSLGSHFIITFKSDPHLDRKHVIFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKINKSKKGRDGSTETHSPELHRGKHKKSSGDKRKRRKYYSSESNSSSDSDTKSSESDSDSDSDTSSSYTSSSSDDRRRKRKRSRKDKHRRGKRRDQHRDKRRRKQDKRSKRKSRRELTCHTESDSDNKSGNSSGGESCDAQAKDQKHKDHSQKHAEGQSSLVVEKELPAALLSKGEKLDMLEEEKFPKVNGERRSNGNEANYRSERSEGRQPDVMDDQPGKSRSQSMSISPKRESRSTSISRKKRLSRSPSGSRSPRAPLRRSLSRSPNRRSISRSPVRGRKGKSVSRSPMQSRGYRSVSVSPDRSLSRSNQRTSPRAPSRRSISRSPVINHNHRSVSRSPIRSRDHRSVSVSPVRSLSRSHKSSPRARSQRSISRSPVRTHNHRSVNRSPVRSSGRRSVSASPVRPLSRSRRRSSPRAPSRRSISRSPVKTGNVSRSPVRSHGHRSVSASPVRSLSRGRWRNSPRAQSRKSISRSPVRVSRKSLSRSPVRTSARSLSRSLSRSSGRVPLRSISRSPARVPSRGNRRSYSRSPRGRSLSRSVSPDVSPKRIRRGRGFSEQYSYARRYRTPSRSPVRSYRYNGRSYRDRYSGYRRYSPRRNRSPLPRRRTPPRFRRRRSRTPSVSRSPRYRGRRYSRSRSRSPVRSRSPVRSRTPVGAYRSRAEKSRSLSRSRSLSRSRASVESQSPQKASRNSRSASPSESPDAKKGLVSYEDGSPYSN* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00714 839 SUPERFAMILY Cyclophilin-like 18 116 IPR029000 -
Phac1g00714 839 MobiDBLite consensus disorder prediction 244 259 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 260 275 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 749 765 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 792 820 - -
Phac1g00714 839 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 113 IPR002130 GO:0000413|GO:0003755
Phac1g00714 839 MobiDBLite consensus disorder prediction 508 530 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 719 743 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 371 394 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 116 839 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 290 337 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 338 355 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 638 664 - -
Phac1g00714 839 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Phac1g00714 839 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 IPR002130 GO:0000413|GO:0003755
Phac1g00714 839 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 75 90 IPR002130 GO:0000413|GO:0003755
Phac1g00714 839 Gene3D - 8 116 IPR029000 -
Phac1g00714 839 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 23 114 IPR002130 GO:0000413|GO:0003755
Phac1g00714 839 MobiDBLite consensus disorder prediction 406 457 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 197 234 - -
Phac1g00714 839 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 22 114 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 116 145 - -
Phac1g00714 839 MobiDBLite consensus disorder prediction 541 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00714 Phac-Chr1 5719321 5726586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00714 23 110 U-box Gene Family AT5G67530 41.111 7.88e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00714 K09566 - gmx:100801588 533.487