Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00713 ATGGCAAAGAAGAAGAATTGTCTGGTGTTTATGGATGTGTCCATCGATGGGGATCCGGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCGAAGACTGCTGAAAATTTCCGTGCATTGTGCACAGGAGAAAGAGGAGTCGGTCCAAGTACTGGAAAGTCGCTGCACTACAAGGGTTCTTTCTTTCATCGAATTGTAAAAGGCTCCTTTGCCCGGGGTGGAGATTTTGTAAACCGGAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCTCCTAGGTTAAAGCATGATGCTCCAGGTCTTCTTTCCATGCCAGTTGCTGATCGTGACAGTCTTGGTTCTCATTTTATCATCACTTTTAAATCTGATCCACATCTTGATAGGAAACATGTAATCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGGAAAGAAGATAAATAAGTCAAAAAAGGGAAGAGATGGATCTACTGAAACCCATAGTCCTGAACTGCATAGGGGAAAGCACAAAAAATCTTCAGGGGACAAAAGGAAAAGGAGAAAGTACTACTCATCAGAATCAAATAGTTCCTCAGATTCAGACACGAAATCTTCAGAAAGTGATAGTGATTCTGACTCAGATACATCCTCATCTTACACAAGTTCCTCCAGTGATGACAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGAAAAAGAAGAGACCAACACCGGGACAAGAGACGAAGGAAACAAGACAAAAGATCAAAACGGAAATCAAGAAGGGAATTGACCTGTCATACTGAGTCAGATAGTGATAATAAGAGTGGCAACAGCTCTGGTGGTGAAAGTTGTGATGCTCAAGCAAAAGATCAGAAGCATAAAGATCATTCTCAGAAACATGCTGAAGGTCAGTCTTCCTTGGTTGTGGAGAAAGAATTACCTGCCGCGCTCCTTTCAAAGGGGGAGAAACTGGATATGCTGGAGGAGGAAAAATTCCCAAAGGTAAATGGAGAGCGGCGTAGCAATGGCAATGAAGCCAACTATAGATCTGAGAGAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAGGCAAATCTAGGAGTCAAAGCATGAGTATTAGTCCAAAGCGTGAGAGCAGAAGTACAAGCATTAGTCGAAAAAAGAGGTTGAGCAGAAGTCCAAGTGGTAGTAGAAGCCCTCGTGCTCCATTACGGAGGAGTTTGAGCAGGAGTCCAAACAGAAGAAGCATCAGCAGAAGCCCGGTGAGAGGTAGAAAGGGGAAAAGCGTCAGTAGAAGCCCTATGCAATCTCGTGGATATAGAAGTGTCAGTGTAAGCCCTGATAGATCCCTTTCTCGGAGCAACCAGAGGACATCACCCAGAGCACCATCACGAAGATCGATCAGCAGAAGCCCTGTGATTAATCACAATCATAGAAGTGTCAGTAGAAGCCCTATTAGATCTCGTGATCATAGAAGTGTCAGTGTAAGCCCTGTGAGATCCCTTTCCCGGAGCCACAAGAGTTCACCCAGAGCACGATCACAAAGATCAATCAGCAGAAGCCCTGTGAGAACACACAATCATAGGAGTGTCAATAGAAGCCCTGTGAGATCTAGTGGTCGGAGAAGTGTCAGTGCAAGCCCAGTAAGACCCCTTTCTCGGAGTCGTAGGAGGAGTTCACCCAGGGCACCATCTAGAAGATCAATCAGTAGAAGCCCAGTGAAAACTGGAAATGTAAGTAGAAGCCCTGTGAGATCTCATGGTCATAGAAGTGTGAGTGCAAGCCCTGTAAGATCGCTTTCTCGGGGCCGTTGGAGGAATTCACCCAGAGCACAATCAAGAAAATCAATCAGCAGAAGCCCGGTAAGAGTGTCCAGAAAGAGTTTAAGCAGGAGTCCAGTTAGAACATCTGCCAGAAGCTTGAGCAGAAGTTTGAGCAGAAGCTCTGGCAGAGTCCCTTTAAGAAGCATTAGCCGAAGTCCAGCTAGAGTGCCAAGCAGAGGCAATCGTCGCAGTTATTCTAGAAGTCCTCGTGGTAGGAGCCTGTCAAGAAGTGTGTCACCTGATGTTTCCCCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACAGTACTCTTACGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGGTCGTACCGCTATAATGGAAGAAGTTACCGTGACAGATATTCAGGTTACAGGAGGTACTCCCCAAGGCGTAATAGGAGCCCACTGCCACGTAGGAGAACTCCACCAAGGTTCCGGAGGAGGAGGAGCAGGACACCGTCTGTATCACGCAGCCCACGGTATCGAGGTCGACGATATAGTCGAAGCCGAAGCCGTAGCCCTGTTCGCAGCCGTAGCCCTGTTCGCAGTCGTACACCTGTTGGTGCATATCGATCTCGTGCTGAGAAGAGTAGGTCTTTGTCCCGGAGTAGAAGTCTATCACGATCTAGGGCGTCAGTGGAATCACAATCTCCACAAAAGGCGAGCAGGAACAGCAGGTCAGCGTCCCCTTCTGAAAGCCCAGATGCAAAGAAAGGCCTTGTATCTTACGAAGATGGTTCTCCTTATTCAAACTAA 2700 0.463 MAKKKNCLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGPSTGKSLHYKGSFFHRIVKGSFARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVADRDSLGSHFIITFKSDPHLDRKHVIFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKINKSKKGRDGSTETHSPELHRGKHKKSSGDKRKRRKYYSSESNSSSDSDTKSSESDSDSDSDTSSSYTSSSSDDRRRKRKRSRKDKHRRGKRRDQHRDKRRRKQDKRSKRKSRRELTCHTESDSDNKSGNSSGGESCDAQAKDQKHKDHSQKHAEGQSSLVVEKELPAALLSKGEKLDMLEEEKFPKVNGERRSNGNEANYRSERSEGRQPDVMDDQPGKSRSQSMSISPKRESRSTSISRKKRLSRSPSGSRSPRAPLRRSLSRSPNRRSISRSPVRGRKGKSVSRSPMQSRGYRSVSVSPDRSLSRSNQRTSPRAPSRRSISRSPVINHNHRSVSRSPIRSRDHRSVSVSPVRSLSRSHKSSPRARSQRSISRSPVRTHNHRSVNRSPVRSSGRRSVSASPVRPLSRSRRRSSPRAPSRRSISRSPVKTGNVSRSPVRSHGHRSVSASPVRSLSRGRWRNSPRAQSRKSISRSPVRVSRKSLSRSPVRTSARSLSRSLSRSSGRVPLRSISRSPARVPSRGNRRSYSRSPRGRSLSRSVSPDVSPKRIRRGRGFSEQYSYARRYRTPSRSPVRSYRYNGRSYRDRYSGYRRYSPRRNRSPLPRRRTPPRFRRRRSRTPSVSRSPRYRGRRYSRSRSRSPVRSRSPVRSRTPVGAYRSRAEKSRSLSRSRSLSRSRASVESQSPQKASRNSRSASPSESPDAKKGLVSYEDGSPYSN* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00713 899 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 809 825 - -
Phac1g00713 899 Gene3D - 1 175 IPR029000 -
Phac1g00713 899 MobiDBLite consensus disorder prediction 431 454 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 568 590 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 779 803 - -
Phac1g00713 899 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Phac1g00713 899 MobiDBLite consensus disorder prediction 852 880 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 698 724 - -
Phac1g00713 899 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Phac1g00713 899 MobiDBLite consensus disorder prediction 350 397 - -
Phac1g00713 899 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 176 899 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 398 415 - -
Phac1g00713 899 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Phac1g00713 899 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Phac1g00713 899 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Phac1g00713 899 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Phac1g00713 899 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Phac1g00713 899 MobiDBLite consensus disorder prediction 601 691 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 257 294 - -
Phac1g00713 899 SUPERFAMILY Cyclophilin-like 5 176 IPR029000 -
Phac1g00713 899 MobiDBLite consensus disorder prediction 304 319 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 176 205 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 320 335 - -
Phac1g00713 899 MobiDBLite consensus disorder prediction 466 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00713 Phac-Chr1 5719321 5726586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00713 25 170 U-box Gene Family AT5G67530 39.189 7.69e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00713 K09566 - pvy:116115710 535.413