Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00712 ATGAATCGGGGCGGGGGGGTGATGGCAAAGAAGAAGAATTCTCTGGTGTTTATGGATGTGTCCATAGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTCTTCTATGATGTTGCTCCAAAAACTGCTGAAAATTTCCGTGCATTATGCACAGGAGAAAGCGGTGTTAGTCCAAATACTGGAAAATCACTGCACTACAAGGGGTCTTTCTTCCATCGAGTTGTAAAAGGATCTGTTGCCCGGGGTGGTGATTTTGTGAATCGAAATGGCACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATGCTCCCGGCCTTCTATCTATGCCTGTTGCTGTTCGTGACACTCTTGGTTCTCATTTTATCATCACTTTTAAAGCCAATCCCCGTCTTGATAGGAAACATGTGGTCTTTGGAAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAAGTGTAACTGTTAAAATAATTAATTGTGGCGAACATAATGAGGATGGAAAGAAGATGAAGAAATCAAAAAAGGGAAGAAATGGGTTTCGCGAAACCAATAATCATGAACTGCATAGGGGGAAGAACAGAAAATCTTCAGGGGACAAAAGGAAAAGGAGAAAGTATTACACATCAGAATCTGATAGTTCCTCAGATTCAGACACGGAATCTTACGAAAGTGGTTGTGATTCTGAATCAGATTTATCTTCATCATCTTACACAAGTTCCTCCAGTGATGACAGGCAGAGAAAGAGGAAGAGATCCAGGAAAGACAGGCATAGACGTGGAAAAAGAAGAGACAAACATCGAGAGAAGAGACGAAGGAAACAAGACAAAAAATCAAAGCGTAGATCAAGAAGGGAATTAGCCAATCATACTGATTCAGACAGTGAAAGTAAGAGTGGCAACAGCTCCGATGGTGAGAGTTGTGGTGCTCAACCGAAAGATCAGAAGCTTAATGAACAATCTCAGAGACATGCTGAAGGTCACTATTCCTTAGTTGTGGAGAAAGAATTACCTCCCATGCACCTTAACAAGGAGAAACTGGATATGCTAGAGGAAGAAGAATTCCCAAAGAAGAATGAAGAGCAATGTAGCTATGGCACTAGAGCCAACTATAGATCTGACCGAAGTGAAGGGAGGCAGCCTGACGTGATGGATGATCAACCAGGCAAATCTAGGAGTCCAAGCATGAGTATTAGTCCCCGGAGCGAGAGGAAAAGCCCTAGTTGTCCAAAAAGGAGGTTGAGAAGAAGTCCAAGTGGCAATGGAAGCCCTCGTGCTCCATCACAGAGGAGCTTGAGTCGGAGTCCTGTTAGAAGCACAAGCAAAAGTCCAAACAGAAGAAACATAAGTAGAAGCCCCGTGAGAGGTAGGAAGGGGAGAAGTTTCAGTAGAAGCCCTGTGAGATCTCGTGGACATAGAAGTGTTAGTGCAAGCCCTGTAAGATCCCTTTCTCAGAACCACCAGAGGACTTCACCCAGAGCAGCATCACGCAGATCAATCAGCAGAAGTCCTGGAAGATCCCTTTCTCAGGGTCACGGGAGGAGTTCACACAGAGTACCATCGCGAACATCAATCAGCAGAAGTCCTGTGAGAAATCACAATCAAAGAACTATCAGTCGAAGCCCGAGATCTCGTGGTCGGAGAAGTGTGAGTGCAAGTCCCGTAAGATCCCTTTCTCGGAGCCACCAGAGTTCACCCAGAGCATCATCACGAAGATCAATCGGCAAAAGCCCTGTGAGAACACTCAATCATAGAGGCGTCAATAGAAGCCCTCTGAGATCTCGTGGTCGTAGTCATAGAAGTGTCAGTGAAAGCCCTATAAGATCTCTTTCTCAGAGCCGTCAGAGGACTTCACCAAAAGCACAATCACGGAGATCAATCAGTAGAAGCCCTGTGAGAACTGACAATCATAGAAGTGTAAGTAGAAGCCCTGTGAGATCTCATGGTCATAGAAGTGTGAGTGCAAGCCCTGTCAGATCACTTTCTCGGGGCCGCCAGAGGAGTTCATCTGGAGAACCTTCACGAAGATCATTAAGCAGAAGCCCAGTAAAAGTGTCAAGAAAGAGTAGCAGGAGTCCAGTTAGATCACCTGCCAGAAGCTCTGGAAGAGTCCCTTTGAGAAGCCATAGCCGTAGTCCAGTTAGGGGGCCAAGCAGAGTCAATAACCGCAATTATTCTAGGAGTCCACGTGGTAGGAGCTTGTCTAGAAGTCTGTCACCTGATGTTTCCCCGAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGATATAGGACTCCCTCTCGATCTCCTGTGAGATCATACCGCTATAATGGAAGAAGTGACCATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCACCACGCAGAAGAACCCCATCAAGGTACCGGAGTAGGAGGAGCAGGACACCATCAGTATCACGGAGCCCACGTTATAGGGGTCGACGATACAGTCAAAGCCGTAGCCCTGTTCGCAGTCGTTCACCTGTGGGCACATATCGACCTCGTGTTGAGAGGAGCAGGTCTTTGTCCCGGAGCAGGAGTCCATCACGCTCCAGGAATTCATTGGAATCACAATCTCCACGAAAGAAGAGCAGGTCAAGGTCCCAAAGCTCCGATGGAAAGAAAGGCCTTGTATCTTACGGAGATGGTTCTCCAGACTCAGATTAATGATGAAAAGAAGATAAATAAAGCAAAAAAGGGAAGAGATGGATCTTCTGAAACCAATAGTCATGAACTGCCTAAGGGAAAGCACCGAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTCTTCAGAATCTGATAGTTCCTCAGATTCAGACACAAAATCTTCAGAAAGTGACAGTGATTCTGACTCTGATATATCTTCATCATCTTACACAAGTTCCTCTAGCGATGATAGACGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGGCGTGGAAAAAGAAGAGATAAACACAGAGATAAGAGACGAAGGAAACAAGATAAAAGGTCAAAGCGTAGATCAAGAAGGGAATTGCCCAGTCATACTGATTCAGATAGTGAGAGTAAGAGCAACAACTTCTCTGATAGTGAAAGTTCTGGTGCTGAAGTGAATGATCAGAATCATGAAGACCATTCTCAAAGACATGCTGAAGGTCAGTCTTCCTCAGTTGTCGGGAAAGAATTACCACCAATGCACCCTAATAAGAGGGAGAAACTGGATATTCTAGAAGAGGAAGAATTACCAAAGGAAAATGGAGAGCGGCGTAGCAATGGCACTGGAGCCAACTATAGATCTGAAAGAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAGACAAATCTAGGAGTCAAAGCACGAGTATTAGTCCCAGGCGCAAGAGCAAAAGCCCAAGCATTAGTCCAAAAAGGAGGCTGAACAGAAGTCCAAGTGGCAGTAGAAGTCCTCATTCTCCATTACAGAGGAGTTTGAGCCAGAGTCCTGTTAGAAGCACAAGGAGGAGTCCATACAGAAGAAGCATCACCAGAAACCCAATGAGAGGTAGGAAGGGTAGAAGTATCAGCAGAAGCTCTGTGAGACCTCATGGACATCGAAGTGTCAGCACAAGCCCTGTAAGACCCCTTTCTCGGAGCTACCAAAAGACTTCACCAAGAACATCATTACGAAGATCGATCAGCAGAAGCCCTACGATATCTCCTGGTCAAAGAAGTGTCAGTGCAAGCCCAGGAAGATCCCCTTCTCGTAGCCAAAGGAGGAGTTCACCTAGAGCACCATCACGAAGATCAATCAGCAGAAGCCCAGTGAGAAATCGCCATCATAGAAGTGTCAGTAGAAGCTCTGTAAGATCTCACGGTCGTAGAAGGGACAGTGTAAGCCCTGTAAGATCCCTTTCTCCATGCCATAGGAAATCACCTAGAGCAAATTCTAGAAGATCAATCAGCAGAAGCCCTGTCGGAACTCGCAACCATAAAAGTGTCAATACAGGCACCTTGAGATCTCGTGGTCATAGAACTAGCAGTGCAAGCCCTGTAAGATCCCTTTCTCGAAGCGGTCGTAGGAGTTCACCCAGAGCACCTTCACAAAGATCAATCAGTAGAAGCCCTGTGAAAACTGACAATCGTAGAAGTGTAAGTAGAAGCCCCTTGCGATCTCGTGGTCACAGAAGTGTGAGTGCTAGCCCTGTTAGATTGCTTTCATCGGACCGCCGAAGGAGTTCACCCAGAGCATCATCACGAAGATTGATCAGTAGAAGCCCAGTTAGAGTGTCAAGAAGGAGTTTAAGCAGGAGTCCTGTTCGATCGTCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTAAGAAGCCATAGCCGGAGTCCAGTTAGAGGGCCAAGCAGAGTCAATCACCGCAGTTATTCTAGGAGTCCTCGTGGTAGGAGCTTGTCTAGAAGTCTGTCACCTGATGTTTCCCCGAAACTAATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGATCATACCGTTATAATGGAAGAAATGACCATATTCAGGTTACAGAAGGTACTCTCCTAGGCGTTACAGGAGCCCACCACCACGCAGAAGAACCCCATCAAGGTACCGGAGTAGGAGGAGCAGGACACCATCTGTATCACGGAGCCCACGTTATAGAGGTCGACGATACAGTTGAAGCCCTGTTCGGCGTTCACCTGTGGGCACATATCGACCTCGTGTTGAGAGGAGCAGATCTTTGTCCCGTAGTAGCAGGTCTTTGTCCCGGAGCAGGAGTCCATCAGGATCCAGGAATTCAGTGGAGTCACAATCTCCACGAAAGAAGAGCAGGTCAAGGTCCCAAAGCATAG 4977 0.4641 MNRGGGVMAKKKNSLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGESGVSPNTGKSLHYKGSFFHRVVKGSVARGGDFVNRNGTGGESIYGSKFPDESPRLKHDAPGLLSMPVAVRDTLGSHFIITFKANPRLDRKHVVFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKMKKSKKGRNGFRETNNHELHRGKNRKSSGDKRKRRKYYTSESDSSSDSDTESYESGCDSESDLSSSSYTSSSSDDRQRKRKRSRKDRHRRGKRRDKHREKRRRKQDKKSKRRSRRELANHTDSDSESKSGNSSDGESCGAQPKDQKLNEQSQRHAEGHYSLVVEKELPPMHLNKEKLDMLEEEEFPKKNEEQCSYGTRANYRSDRSEGRQPDVMDDQPGKSRSPSMSISPRSERKSPSCPKRRLRRSPSGNGSPRAPSQRSLSRSPVRSTSKSPNRRNISRSPVRGRKGRSFSRSPVRSRGHRSVSASPVRSLSQNHQRTSPRAASRRSISRSPGRSLSQGHGRSSHRVPSRTSISRSPVRNHNQRTISRSPRSRGRRSVSASPVRSLSRSHQSSPRASSRRSIGKSPVRTLNHRGVNRSPLRSRGRSHRSVSESPIRSLSQSRQRTSPKAQSRRSISRSPVRTDNHRSVSRSPVRSHGHRSVSASPVRSLSRGRQRSSSGEPSRRSLSRSPVKVSRKSSRSPVRSPARSSGRVPLRSHSRSPVRGPSRVNNRNYSRSPRGRSLSRSLSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDHIQVTEGTPLGVTGAHHHAEEPHQGTGVGGAGHHQYHGAHVIGVDDTVKAVALFAVVHLWAHIDLVLRGAGLCPGAGVHHAPGIHWNHNLHERRAGQGPKAPMERKALYLTEMVLQTQINDEKKINKAKKGRDGSSETNSHELPKGKHRKSSGDKRKRRKYYSSESDSSSDSDTKSSESDSDSDSDISSSSYTSSSSDDRRRKRKRSRKDKHRRGKRRDKHRDKRRRKQDKRSKRRSRRELPSHTDSDSESKSNNFSDSESSGAEVNDQNHEDHSQRHAEGQSSSVVGKELPPMHPNKREKLDILEEEELPKENGERRSNGTGANYRSERSEGRQPDVMDDQPDKSRSQSTSISPRRKSKSPSISPKRRLNRSPSGSRSPHSPLQRSLSQSPVRSTRRSPYRRSITRNPMRGRKGRSISRSSVRPHGHRSVSTSPVRPLSRSYQKTSPRTSLRRSISRSPTISPGQRSVSASPGRSPSRSQRRSSPRAPSRRSISRSPVRNRHHRSVSRSSVRSHGRRRDSVSPVRSLSPCHRKSPRANSRRSISRSPVGTRNHKSVNTGTLRSRGHRTSSASPVRSLSRSGRRSSPRAPSQRSISRSPVKTDNRRSVSRSPLRSRGHRSVSASPVRLLSSDRRRSSPRASSRRLISRSPVRVSRRSLSRSPVRSSARSLSRSSGRVPLRSHSRSPVRGPSRVNHRSYSRSPRGRSLSRSLSPDVSPKLIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDHIQVTEGTLLGVTGAHHHAEEPHQGTGVGGAGHHLYHGAHVIEVDDTVEALFGVHLWAHIDLVLRGADLCPVVAGLCPGAGVHQDPGIQWSHNLHERRAGQGPKA* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1000 1037 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 919 1519 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1441 1479 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 408 422 - -
Phac1g00712 1658 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 17 181 IPR002130 GO:0000413|GO:0003755
Phac1g00712 1658 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 8 189 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 469 485 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 356 379 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 664 725 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1206 1222 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 621 647 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 788 802 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 390 404 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 335 349 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 303 317 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 231 260 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 486 555 - -
Phac1g00712 1658 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 16 181 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1064 1078 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1144 1202 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 183 213 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1295 1311 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1486 1512 - -
Phac1g00712 1658 SUPERFAMILY Cyclophilin-like 9 183 IPR029000 -
Phac1g00712 1658 Gene3D - 5 182 IPR029000 -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 760 780 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 957 981 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 921 948 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 183 831 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1223 1294 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1129 1143 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1092 1115 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1340 1397 - -
Phac1g00712 1658 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Phac1g00712 1658 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 83 IPR002130 GO:0000413|GO:0003755
Phac1g00712 1658 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 IPR002130 GO:0000413|GO:0003755
Phac1g00712 1658 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 34 49 IPR002130 GO:0000413|GO:0003755
Phac1g00712 1658 MobiDBLite consensus disorder prediction 562 606 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 439 468 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1038 1052 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 1413 1430 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 268 302 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 732 758 - -
Phac1g00712 1658 MobiDBLite consensus disorder prediction 318 334 - -
Phac1g00712 1658 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 180 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00712 Phac-Chr1 5691642 5710405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00712 33 177 U-box Gene Family AT5G67530 38.776 3.49e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00712 K09566 - gmx:100801588 771.155