Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00708 ATGGATTCTCCAGAACCTTTCAAGAACAACAACAATGGCAGTTCTTCTCCCTCCACTCCCAACAGCAACAACAATTCCCCGGATTCCCCTCAAGAAGAATCCCCTTTTTATAGATACGTAAGCTCTTTATCTCCAATAAACATCAAGGCTTCTCATGGCACACGAAGTTTTGTAGGGCTCAGTTCTCCACCTCTTGTATTCAAGTCTCCACGTATTAGTCACCGTGCAACACAGTTCATGCAAAGGTCACAAGGCGATCAGTCAGTCTCGGAAGTGCGATCTCAAAGTGAAAATGGAGGCAACATTCTTGGTGAAGCTTCTGGGTATTACTTGAAATCAAATTCTCATCAGCCACCGCCAGAGAGGTTTATAACTGACACTCAAAAGGTTTTTGACCCCAAGAATGATGCAAATATGCAACACTACGGTGAACATTTCTCTATTTATAAATATTTGGCTGATCCCGGGGATATTGATCAAATGTATTCAGCTGACCAAGATGTGGAACAACAATCTACAGATGCAGCTGAAACATCACTTAGTTACCCAACTCAGTCAAATATATTAAATATTGGCAGGAAAGAGGGTCTTGGTGATAAAGCAGAAGAATCTTTGATTCTGTCAGAGGATTCCTACAAGGTTCATCAACAGATGCCAGTATCCGGTGAAGAACCTAAAAGGATGGAAGGGGAGCAAAGTGATGTTAAGAATCGATACAGTCATGATCCACTTCTTCCCCAGGCTACTCTAAAGTCCAATGATGTTGGAAGACGCCGCCTACAGTTTGAGGAAGGAGCTTCCAGTGCTCTTGAAAGTAACAAGTCTCGTGAGAAACTGAATGCAACTTCCTCCTTGTATCCTCAGCAAGGTTGTGGAAACTTACCTTTGCCAAGTTCCAAGCCATCAGGTATTGGGTTGCATTTAAATAGCATCGTAAATGCTATGCCAACTAATGAGGCTGCAACTACGAGTGTGAGATTACCAGATAGTTCACCAAGGATGAAATCCACATCCTCAGAAAGGTTGCAAAGAAGGGAGAATATGAAGGGATCCATGCTTTCGTCCAATGTCAATGCGGAATCATCAGTTGATACTAGAACCGAGAGTCATGAAATTGATGCTACACATGCTGGAAATTCCGAGGAATTCAACAGATCTCCTAGCCCCTGCAAGAAAAAGAAGAAAACATCAGTCGCTCCTAATCAAGATGGCTGTAAAGGGTGCCGCTGTAAGAAGAGTAAATGTATAAAACTTTACTGTGAGTGTTTTAATGCCGGAGTCTACTGCAATGGCCCTTGTGGTTGCCAAGACTGCTTAAACAGACCAGAATATAAAGAGACGGTTATGGAGTCTAAACAACAAATCGAATCCCGCAATACGGAAAATTCGGCAAGGCTCAAAAGAGGTTGCAATTGCAAAAGATCTACATGTCTGAAAAAATATTGCGAATGTTATCAGGCTAAAGTTGGATGCTCTAGTGGATGTGGATGTCAGGGATGCAAGAATTCCTATGGCAAGAAAGAAGATTATGTGGCGGTTCAACATACTTGGAATATAGAAAGGATGAGTGGAAATAATCAGGAAATGGTGGCAAGCGAGACAGATTATGATCTACGGCGACTCTCACCTATAACACCATCATTGCAATGCTCTGACCAAGGCAAGGAGGCTGCAAAATCCAGAGTTGTTAACATGTTTGCATCTTGTTCAAACAACACTCAATCTTCTGAAGATGATGGGACTGTGGTAACAGAGATGCTGCGAAATGATCCTTATGATTCGGAAATTGAATGCAACAATGATTTGTTACTTCAGGACACTCTTCGACCCAATCCTCCATTTTCATATGCAGCTAATCGGTGGAAAACTGTTTCTCCATCCCCATTCTCACGCGAACCTATTCGCCAGTGTCCTGGATCAGATTGCACGCTCGTTAACATGATAGTACATGAAATTCATGAAGCTTCAACTGTTCCTCCTTTCCCTCCATTGTCTCCTTGCGTTTATTCCAAAAGCAATAACAACGAAGATCTGGGTAACAGTCAGAGCAAGGATCCACATTCTCCGATCAGATGA 2076 0.4244 MDSPEPFKNNNNGSSSPSTPNSNNNSPDSPQEESPFYRYVSSLSPINIKASHGTRSFVGLSSPPLVFKSPRISHRATQFMQRSQGDQSVSEVRSQSENGGNILGEASGYYLKSNSHQPPPERFITDTQKVFDPKNDANMQHYGEHFSIYKYLADPGDIDQMYSADQDVEQQSTDAAETSLSYPTQSNILNIGRKEGLGDKAEESLILSEDSYKVHQQMPVSGEEPKRMEGEQSDVKNRYSHDPLLPQATLKSNDVGRRRLQFEEGASSALESNKSREKLNATSSLYPQQGCGNLPLPSSKPSGIGLHLNSIVNAMPTNEAATTSVRLPDSSPRMKSTSSERLQRRENMKGSMLSSNVNAESSVDTRTESHEIDATHAGNSEEFNRSPSPCKKKKKTSVAPNQDGCKGCRCKKSKCIKLYCECFNAGVYCNGPCGCQDCLNRPEYKETVMESKQQIESRNTENSARLKRGCNCKRSTCLKKYCECYQAKVGCSSGCGCQGCKNSYGKKEDYVAVQHTWNIERMSGNNQEMVASETDYDLRRLSPITPSLQCSDQGKEAAKSRVVNMFASCSNNTQSSEDDGTVVTEMLRNDPYDSEIECNNDLLLQDTLRPNPPFSYAANRWKTVSPSPFSREPIRQCPGSDCTLVNMIVHEIHEASTVPPFPPLSPCVYSKSNNNEDLGNSQSKDPHSPIR* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00708 691 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 459 IPR044522 GO:0003700
Phac1g00708 691 MobiDBLite consensus disorder prediction 320 337 - -
Phac1g00708 691 MobiDBLite consensus disorder prediction 213 256 - -
Phac1g00708 691 MobiDBLite consensus disorder prediction 668 691 - -
Phac1g00708 691 MobiDBLite consensus disorder prediction 1 38 - -
Phac1g00708 691 SMART CXC_2 465 506 IPR033467 -
Phac1g00708 691 SMART CXC_2 403 444 IPR033467 -
Phac1g00708 691 MobiDBLite consensus disorder prediction 320 403 - -
Phac1g00708 691 MobiDBLite consensus disorder prediction 220 238 - -
Phac1g00708 691 MobiDBLite consensus disorder prediction 364 378 - -
Phac1g00708 691 ProSiteProfiles CRC domain profile. 404 505 IPR005172 -
Phac1g00708 691 MobiDBLite consensus disorder prediction 348 363 - -
Phac1g00708 691 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 406 441 IPR005172 -
Phac1g00708 691 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 468 503 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00708 Phac-Chr1 5640785 5645626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00708 303 520 CPP Transcription Factor Family AT3G22780 39.095 1.20e-41 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Phac1g00708 TCR 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00708 K21776 - gmx:547664 678.707