Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00692 ATGGTACAAGCAAAGAAGTTCAGAGGAGTGAGGCAACGCCAATGGGGCTCATGGGTGTCAGAAATTCGTCACCCTTTGCTGAAGAGAAGGGTGTGGCTAGGGACATTCAAGACAGCAGAGGCTGCAGCAAGGGCATATGACAAAGCAGCCATTTTGATGAATGGTCAAAATGCCAAGACCAATTTCCCTGCACCACCGTTGAATCAGCCTGAAGGTGCCACCACCACTGCCACTGTTTGTGAAGACCCTTTTTCATCTCCCAATGTTCTTGCTGAGCATCTGAGTGGAAAGCTGAAGAGGTGCTGCAAAGACCCTTCTCCATCCCTCACATGTCTCAGGCTGGATGCTGACAACTCCCACATTGGAGTGTGGCAAAAGGGTGCAGGACCACATTCAGACTCCAATTGGATTGTCAGGGTGGAGCTTGGGAAGAAACATGCAGAGAGTGAGTCAAGTGTATCAGAAGGGTCTCCACAAAAAAGTGCTAGTGATGGTGAAGAAGAAGAAGAAGAAGATAGAATTGCCATGCAGATGATTGATGAGCTTCTTAATTGGAATTATTATCCCTGTGGTTCAAGTAATTAA 585 0.4718 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFKTAEAAARAYDKAAILMNGQNAKTNFPAPPLNQPEGATTTATVCEDPFSSPNVLAEHLSGKLKRCCKDPSPSLTCLRLDADNSHIGVWQKGAGPHSDSNWIVRVELGKKHAESESSVSEGSPQKSASDGEEEEEEDRIAMQMIDELLNWNYYPCGSSN* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00692 194 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Phac1g00692 194 MobiDBLite consensus disorder prediction 146 172 - -
Phac1g00692 194 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 154 - -
Phac1g00692 194 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Phac1g00692 194 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Phac1g00692 194 CDD AP2 5 64 IPR001471 GO:0003700|GO:0006355
Phac1g00692 194 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Phac1g00692 194 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Phac1g00692 194 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Phac1g00692 194 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Phac1g00692 194 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00692 Phac-Chr1 5513178 5514023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00692 1 192 AP2-EREBP Transcription Factor Family AT5G25390 57.292 3.81e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g00692 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00692 - - gmx:100784305 313.153