Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00683 ATGGGAAAACAGTGGTCTCTCTTCAGTGTTATGGATACCCTTTTATTGTGTGTCCTTCTTTCGTCTGAAGTAGTTTTGACAAGTATTCTTAAGGTTGGCAAAGTCTATCCGCGGATTGAAGGTTCTCAAATGAATTGGATTGACAAGGATGGCATTTTGCTTGTTTCATACAAAGGAGAATATGGATTTGGCTTTGTCACCACTCCAAATGACACCACACTGTTTCTACTAGCAATACTCCACATGGGCAGCAACAGAATGGTTTGGGTAGCAAATAGGGGTCTTCCTGTTTCCAACTCTGATAAGTTTGTGTTTGATGAGAAGGGCAACCTCTATTTGCTTAAAGGAGCAGCAGTGGTGTGGTCTGCAGGTACAGAAGACAAGGGAGTTTCTTCAATGGAATTGAAAGACACTGGAAACTTGGTTTTGCTAGGGAATGATAGTAGTGTGATTTGGCAGAGTTTCAGCCACCCAACAGATACCTTGTTGCCAATGCAGGACTTCATTGAGGGAATGAAACTTTTCAGTGAACCTGGTCCTAACAACTTGACCTATATTCTTCAGATTGAATCTGGCAATCCCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGGAGGATAGCCGCAAAAAAATCATCTACAAAAATGGTGTGGTGGCTTCAGCTACCATTAATGCAAGCTCCTGGAGCTTCTATGATCAAACTAAATCCTTGTTGTGGCAATTTGATTTTGCTGAAGAATCAGATTCAAATGGCACTTGGATTTTAGTTTTGGGGAGTGACGGCCTCATCACATTCTCCAATCTCCAAAGTGGAGGAGCAACTGTTGCTTCACCAAGAAGAATACCACAAGATTCTTGCAGCACCCCAGAACCTTGTGATCCGTATTACGTATGCAGTGGTGAAAAAAAGTGCACCTGCCCTTCTGTTCTTAGCTCTAGTCCTAATTGCAAACCCGGGTTTGTCTCTCCTTGCAGCTCAAAAGGCACCATTGAGCTCCTCAAAGCTGATGATCGACTCAATTACTTTGCACTTGGATTTGTTCCACCCTCTTCGAAGACTGATCTGATTGGTTGCAAAACCTCTTGCAGTGCAAATTGCTCATGCCTTGCTATGTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTATTGGACTGGATTGGAAGCTTTGAGAAATCTGTCGAAGACTCTGGTTTAGTGTCCTACATTAAGGTGGTATCTAGAGATGGAGACACTAGAGACAGTGGAAGCAGCACTGTGCAGGCAATAGTTGTTGTTATCATTGTGATAGTAACATTGTTTGTCATTTCTGTTATGCTGTTTGTGGCACATAGATGTTTCAGGGAAAAAGAAGATTTTCCTGAGTCTCCTCAAGAGAATTCAGAAGATGACAATTTCTTGGAGGGTTTAACCGGCATGCCAATCCGTTACAGCTACAACGATCTAAAAACTGCAACAAGTAACTTCTCAGTGAAGCTAGGAGAAGGGGGGTTTGGATCAGTTTATAAAGGAGCTGTACCAGATGGTACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAAGGGTATCTTGCACCTGAGTGGATCACAAACTGTGCCATATCAGAGAAAAGTGACGTTTATAGCTATGGCATGGTGTTACTGGAGATCATTGGAGGGAGGAAAAACTATGATCCTCGGGAAACTTCAGAGAAAACCAATTTCCCATCTTTTGCTTTTAAGATGATGGAAGAAGGGAAGGTGAGAGAGATTCTTGACTCAAAGCTAGAAACTAATGAAAATGATGAGAGGGTTCAAACTGCTGTAAAAGTTGCATTGTGGTGCATACAAGAAGACATGTCTTTGAGGCCTACCATGACCAAAGTTGTCCAAATGCTAGAGGGTCTATGCACTGTTCATAAGCCACCAAGTTGTTATGTCCTTGGTTCTCAGTTTTACTCAAATAGTGATGCCGGCACTTCTTCAGGACCATCAGATTGTAACAGTGATGCCAATCTTTCTGCTGTTAGGCTTTCAGGGCCAAGATAA 2058 0.4252 MGKQWSLFSVMDTLLLCVLLSSEVVLTSILKVGKVYPRIEGSQMNWIDKDGILLVSYKGEYGFGFVTTPNDTTLFLLAILHMGSNRMVWVANRGLPVSNSDKFVFDEKGNLYLLKGAAVVWSAGTEDKGVSSMELKDTGNLVLLGNDSSVIWQSFSHPTDTLLPMQDFIEGMKLFSEPGPNNLTYILQIESGNPILSTGLQTPQPYWSMKEDSRKKIIYKNGVVASATINASSWSFYDQTKSLLWQFDFAEESDSNGTWILVLGSDGLITFSNLQSGGATVASPRRIPQDSCSTPEPCDPYYVCSGEKKCTCPSVLSSSPNCKPGFVSPCSSKGTIELLKADDRLNYFALGFVPPSSKTDLIGCKTSCSANCSCLAMFFNSSSGNCFLLDWIGSFEKSVEDSGLVSYIKVVSRDGDTRDSGSSTVQAIVVVIIVIVTLFVISVMLFVAHRCFREKEDFPESPQENSEDDNFLEGLTGMPIRYSYNDLKTATSNFSVKLGEGGFGSVYKGAVPDGTQLAVKKLEGIGQGKKEGYLAPEWITNCAISEKSDVYSYGMVLLEIIGGRKNYDPRETSEKTNFPSFAFKMMEEGKVREILDSKLETNENDERVQTAVKVALWCIQEDMSLRPTMTKVVQMLEGLCTVHKPPSCYVLGSQFYSNSDAGTSSGPSDCNSDANLSAVRLSGPR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00683 685 FunFam Serine/threonine-protein kinase 41 156 - -
Phac1g00683 685 SUPERFAMILY Protein kinase-like (PK-like) 474 523 IPR011009 -
Phac1g00683 685 MobiDBLite consensus disorder prediction 662 685 - -
Phac1g00683 685 ProSiteProfiles Bulb-type lectin domain profile. 38 156 IPR001480 -
Phac1g00683 685 CDD B_lectin 47 158 IPR001480 -
Phac1g00683 685 MobiDBLite consensus disorder prediction 662 678 - -
Phac1g00683 685 Gene3D Transferase(Phosphotransferase) domain 1 486 646 - -
Phac1g00683 685 Pfam Protein kinase domain 531 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00683 685 ProSitePatterns Protein kinases ATP-binding region signature. 498 521 IPR017441 GO:0005524
Phac1g00683 685 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 43 531 - -
Phac1g00683 685 SMART blect_4 45 158 IPR001480 -
Phac1g00683 685 Gene3D - 46 157 IPR036426 -
Phac1g00683 685 Pfam D-mannose binding lectin 87 167 IPR001480 -
Phac1g00683 685 SUPERFAMILY Protein kinase-like (PK-like) 532 656 IPR011009 -
Phac1g00683 685 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 209 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00683 Phac-Chr1 5440313 5442748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00683 531 646 Receptor kinase-like Gene Family AT5G20050 48.780 8.75e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac1g00683 Pkinase 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00683 - - gmx:100787500 883.248