Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00656 ATGGGGAAGCCGGCGGGTAAAAAGAAAGATCTGGAGATTCCCGCTCCCGCCACCAAGGCCAACGGTCACCACCCGTCAAAATCATGGGAGGAGAAACGCGGGGCGGCGGCGGCGGCGTCGTCGAAGACGTTGGACGAGGACACGGCGATGTTCATAAACATGTCGCAGGAGCTTCGAGAGGAAGGGAACAGGTTGTTTCATAAGAAGGACAACGAGGGAGCGATGTTGAAGTACGAAAAGGCCCTCAAGCTTCTGCCGCGGAACCACATCGACGTGGCGCACCTCCACACCAGCATGGCCATGTGCTACATGCAGCTGGGGCTGGGCGAGTTCCCGCGCGCCATCAGCGAGTGCAACATGGCGCTGCAGGTGTCGCCGCGCTACACGAAGGCGCTGCTGAAGCGGGCCAAGTGCTACGAGGCGCTGAACCGCGTGGACCTGGCGATGCGCGACGTGCGCGTGGTGCTGAATTTGGAGCCCAATAACTTGACGGCGCTGGAGGTTTTGGATAGCTTGAGGGAGACGATGGAGGAGAAGGGGATTGTGATTGACGAGACGGAGATAGCCCTCGCGGCGCTGCAGCAGCATCCGGAGCCGCCTTCGTCGCGGCTGAGGAAGGTGGTCAGGGAGAAGATCAAGAAGAATAAGAAGGAAATCAAGGGGGAGGATGAGGGAAAAGCGAAAAAGATTATCGTTGAAGAGAAGGTTAAGGTTGATAATGTCAGAAAAAAGGAGAAAGAGAAATTGGGGAAAATAGAGAAGGAGAAATTGGAGAAAGTAGAGAAGGAGAAATTGGAGAAAGTGGAGAAGGGGAAATTGGGGAAGGAAGAGAAAGGGAAATTGGGGAGGGAAGAGAAAGGGAAATTGGGGAAAGAAGAAAAAGGTGGTGTTACTAGGACTGTGAAGTTGATATATGGAGAGGATATTAGATGGGCACAATTGCCTGTGAATTGTGGAATGAGGTTGGTGAGGGATGTGATAAGGGACAGGTTTCCGGGCTTGAAGGGTGTTCTTGTGAAGTATAAGGATAGGGAGGGTGATTTGGTTACTATAACTAGTACTTCTGAATTGAGGCTGGCTGAGACTTGTCATGTTCTTGGGTCGATTCGGCTTTATGTGACGAAGGTTGAGCCGGAAGAGGAGCCATTTTATGATGATGGGGTTGTGGCGGAAGGTGGGAAGGTGGTTGAGAATGGGAATGGGGGTGTGGGGAAGGGGGGGAGTAGTACTGTGGAGGATTGGCTTGTGCAGTTTGCTAGGTTGTTTAAGAATCATGTTGGGTTTGATTCAGATGCGTATTTGGATATTCATGGGATTGGGATGAAGTTGTATTCGGAGGCCATGGAGGATTCAGTGACAAGTGAGGCTGCTCAGGAGCTGTTTGAGATTGCTGCGGATAGGTTTCAGGAGATGGCGGCTTTGGCTTTGTTCAATTGGGGGAGTGTGCATATGTCAAGGGCTAGGAAGAGGGTGAGTTTTCCGGAGGATGGATCAAGGGATTCTTCGTTTGAGTGTGTTCAAACAGCTTATGAATGGGCTCAGAAGGAGTATATGAAAGCAGAGAAGAGATTTGGAGAAGCTGTGAAGATCAAACCGGATTTTTATGAAGGGCTTCTTGCTTTGGGGCATCAGCAATTTGAGCAAGCAAGGCTGTGCTGGTGTTTATTGACTGCGAACGAGAAGGATTTAGAAGTCAGACATTCGGATGAGGTTCTGCAGCTCTATAACAAGGCTGAGGACAACATGGAGAAAGGCATGATGATGTGGGAGGAGTTGGAGGAGCGGCGATTGAATGGACTGTCCAAATCGGATAAGTATAAAGACCAGCTAGAGAAAATAGGGTTGCATGGTATTTTCAGGGATGTTTCTTCTGATGAAGCTGATGAACAGGCTGCAAGGATGAGGTTGCAAATATATCTTTTATGGGGCACTTTGTTGTATGAGCGTTCTGTTGTGGAGTATAAGCTAGGCCTGCCAACATGGGAAGAATGTGTAGAGGTTGCAGTTGAAAAATTTGAACTTGCTGGAGCTTCTACAACTGATATTGGGGTCATGATAAAGAACCATTGTTCTAATGAAACGGCAATGGAAGGGTTCAAAATTGATGAGATAGTGCAAGCTTGGAATGAGATGTATGATGGGTGGCAGTTTGATGTCCCATCATTTCGACTTGAGCCGTTGTTCCGTCGGCGTGTTCCAAAACTCCATTACATACTGGAGCAATTTTGA 2229 0.4926 MGKPAGKKKDLEIPAPATKANGHHPSKSWEEKRGAAAAASSKTLDEDTAMFINMSQELREEGNRLFHKKDNEGAMLKYEKALKLLPRNHIDVAHLHTSMAMCYMQLGLGEFPRAISECNMALQVSPRYTKALLKRAKCYEALNRVDLAMRDVRVVLNLEPNNLTALEVLDSLRETMEEKGIVIDETEIALAALQQHPEPPSSRLRKVVREKIKKNKKEIKGEDEGKAKKIIVEEKVKVDNVRKKEKEKLGKIEKEKLEKVEKEKLEKVEKGKLGKEEKGKLGREEKGKLGKEEKGGVTRTVKLIYGEDIRWAQLPVNCGMRLVRDVIRDRFPGLKGVLVKYKDREGDLVTITSTSELRLAETCHVLGSIRLYVTKVEPEEEPFYDDGVVAEGGKVVENGNGGVGKGGSSTVEDWLVQFARLFKNHVGFDSDAYLDIHGIGMKLYSEAMEDSVTSEAAQELFEIAADRFQEMAALALFNWGSVHMSRARKRVSFPEDGSRDSSFECVQTAYEWAQKEYMKAEKRFGEAVKIKPDFYEGLLALGHQQFEQARLCWCLLTANEKDLEVRHSDEVLQLYNKAEDNMEKGMMMWEELEERRLNGLSKSDKYKDQLEKIGLHGIFRDVSSDEADEQAARMRLQIYLLWGTLLYERSVVEYKLGLPTWEECVEVAVEKFELAGASTTDIGVMIKNHCSNETAMEGFKIDEIVQAWNEMYDGWQFDVPSFRLEPLFRRRVPKLHYILEQF* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00656 742 SMART tpr_5 501 534 IPR019734 GO:0005515
Phac1g00656 742 SMART tpr_5 55 88 IPR019734 GO:0005515
Phac1g00656 742 SMART tpr_5 129 162 IPR019734 GO:0005515
Phac1g00656 742 SMART tpr_5 93 128 IPR019734 GO:0005515
Phac1g00656 742 Pfam PB1 domain 298 374 IPR000270 GO:0005515
Phac1g00656 742 Gene3D - 291 375 - -
Phac1g00656 742 ProSiteProfiles TPR repeat profile. 129 162 IPR019734 GO:0005515
Phac1g00656 742 SMART PB1_new 298 376 IPR000270 GO:0005515
Phac1g00656 742 ProSiteProfiles PB1 domain profile. 298 376 IPR000270 GO:0005515
Phac1g00656 742 CDD PB1 300 373 - -
Phac1g00656 742 Gene3D Tetratricopeptide repeat domain 52 180 IPR011990 GO:0005515
Phac1g00656 742 PANTHER PROTEIN CLMP1 1 740 IPR044517 -
Phac1g00656 742 Coils Coil 243 263 - -
Phac1g00656 742 SUPERFAMILY TPR-like 49 174 IPR011990 GO:0005515
Phac1g00656 742 SUPERFAMILY CAD & PB1 domains 298 384 - -
Phac1g00656 742 ProSiteProfiles TPR repeat profile. 55 88 IPR019734 GO:0005515
Phac1g00656 742 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00656 Phac-Chr1 5220929 5225230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00656 45 178 Calmodulin-binding Proteins AT3G25230 27.273 6.04e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00656 K26538 - mnt:112092242 874.774