Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00648 ATGTCTATGTATAACAATATTGAAAATTACCTTCAACAAAATAGTTTGACACCTATTAGATACTCATATAAGGAAATCAAGAAGATGGCTGCAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTGTGCAGTGGGCCTTTTGTGGCTATCAAAATGTTAGGTAAATCCAAAGCAAATGGACAAGATTTTATCAATGAAGTTGCGACTATTGGAAGAATACATCATCAAAATGTGGTACGGTTAATTGGATTTTGTGTTAGCGGCTCAAAGCGTGCTCTTGTTTATGAATTTATGCCCAATGGCTCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGTTATGAAAAGATATATAATATATCAATTGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGACATCAAACCTCATAACATCTTATTGGATGAAAACTTCATCCCTAAGGTTTCCGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGTATCGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAACTATTTTACAAAAATATTGGAGGAATATCCCATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGGCGAGCAAGAGGAAGAATCTAAATCCCCATGTAGACCACTCAAGTCAACTTTACTTTCCCCTTTGGATTTATGATCATATTAGGAAATGGGAAGATGTAGACATCGAAGATGTGACAGAAGAGGAAAATAAAATAGCAAAGAAGATGATTATAATTGCACTATGGTGTATACAACTAAAACCAAATGATCGTCCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGGGATACTGAAGACTTGGAAATACCTCCAAAACCTATTCTATTTCCAGAAGATGAAACCGTGACAGAGGATCAAACAATCAACACTAGATATATTCAATGTTGA 1011 0.3581 MSMYNNIENYLQQNSLTPIRYSYKEIKKMAAGFKEKLGEGGFGSVFKAKLCSGPFVAIKMLGKSKANGQDFINEVATIGRIHHQNVVRLIGFCVSGSKRALVYEFMPNGSLDKFIFSKERNIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASKRKNLNPHVDHSSQLYFPLWIYDHIRKWEDVDIEDVTEEENKIAKKMIIIALWCIQLKPNDRPSMNRVVEMLEGDTEDLEIPPKPILFPEDETVTEDQTINTRYIQC* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00648 336 FunFam serine/threonine-protein kinase PBS1-like 2 105 - -
Phac1g00648 336 SMART serkin_6 31 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00648 336 Pfam Protein kinase domain 34 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00648 336 ProSitePatterns Protein kinases ATP-binding region signature. 37 59 IPR017441 GO:0005524
Phac1g00648 336 ProSiteProfiles Protein kinase domain profile. 31 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00648 336 SUPERFAMILY Protein kinase-like (PK-like) 15 302 IPR011009 -
Phac1g00648 336 Gene3D Phosphorylase Kinase; domain 1 5 105 - -
Phac1g00648 336 Gene3D Transferase(Phosphotransferase) domain 1 106 310 - -
Phac1g00648 336 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 321 IPR045874 GO:0004672
Phac1g00648 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Phac1g00648 336 FunFam PR5-like receptor kinase 106 313 - -
Phac1g00648 336 PIRSF ILK 11 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00648 Phac-Chr1 5163234 5164447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00648 20 325 Receptor kinase-like Gene Family AT5G38280 51.125 6.57e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00648 Pkinase 4.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00648 - - vun:114195573 572.007