Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00647 ATGATGTGGAGAGAGAGCGCAGTGTTGGTGGTACTGCTACTTCTAGTTCACCATATTTCTGCTACCAAGGACGACCAAGAACACGTTTGTCCTCCTTCTTCCTGTGGAAATATCACCAACATCAGCTATCCATTTCGATTAAAAGGCGACCCAGAAGAGTGTGGTGACAAAAGGTATGAGCTTGGTTGTGTGAATAATGTTACGGTGTTGTATCTGTACTCTGCAAAATATCATGTGGAGGCAATAAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTTCGTTTCCTCTCTCGCTCCAATTTCTCTGACACTTACACTTACACTTCATTTTACGACCCGGGTCCATACCAAGCCAGTTTTGTCTATGAAAATTGGGAATCTCTGAGTTTCAAGCATATAGTGTTTGTGAATTGTAACGATTCGGTGGGAGAGAAAGGGAAGTATGTGGAGATTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCTCAGGACTTAGAACTTGGGTGTGACGTAAAGCTTGTTGCTCCAACTTCTCTCTCCACTTTCGATAACCATTCCTACACTTCCATTCACACCGCACTCGCCTTGGATTCGAGATATCATGGATACAACTCGCCTGTCAGACACATTGTCCAGATGATGATAGCTATTGCTATGTCGACTCTTCTAACCAGAAGCTTCAATGCATCAAAGATTTCATTTTCTCTTTCAACGGTTCACCATGTCAAATATCCCATAAGTAGACTCAAATCTTCGAGCTTGGCACCTATTAGATACTCATACAAGGAAATCAAGAAAATGGCAGCAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTACTTAGTGGATCTTCTGTGGCCATCAAAATGTTAGGCAAATCCAAAGGAAATGGACAAGATTTTATCAATGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTACGGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTTTATGAATTTATGTCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATTGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGACATCAAACCTCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTAAATCCAATAGATAATAGTATTGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAACTATTTTACAAAAATATTGGAGGAATATCCCATAAAGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGGCGAGCAGGAGGAAGAATCTAAATCCCCATGTAGACCACTCAAGTCAACTTTACTTTCCAATTTGGATCTATGATCATATCGAAGAAGAGGAAGATATAGATATGGAAGATTTGACTGAAGAGGAAAAGATAATAGCAAAGAAAATGATCATAGTGTCTCTTTGGTGCATACAGTTGAAACCAAGCGATCGACCCTCAATGAATAGAGTAGTAGAAATGCTTGAAGGAGACATTGAAGACTTGGAAATACCTCCAAAACCTACTTTATTTCCAGATGAAATGAGTACATATGTTGAAACAACAAACTCGACATCGAATGAATTGAACACGTTCTCTTAA 1803 0.3955 MMWRESAVLVVLLLLVHHISATKDDQEHVCPPSSCGNITNISYPFRLKGDPEECGDKRYELGCVNNVTVLYLYSAKYHVEAINYKNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTYTSFYDPGPYQASFVYENWESLSFKHIVFVNCNDSVGEKGKYVEIGEWVKWEGKGYAYAIGGDLKAQDLELGCDVKLVAPTSLSTFDNHSYTSIHTALALDSRYHGYNSPVRHIVQMMIAIAMSTLLTRSFNASKISFSLSTVHHVKYPISRLKSSSLAPIRYSYKEIKKMAAGFKEKLGEGGFGSVFKAKLLSGSSVAIKMLGKSKGNGQDFINEVATIGRIHHQNVVRLIGFCVSGSKRALVYEFMSNGSLDKFIFSKERNIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASRRKNLNPHVDHSSQLYFPIWIYDHIEEEEDIDMEDLTEEEKIIAKKMIIVSLWCIQLKPSDRPSMNRVVEMLEGDIEDLEIPPKPTLFPDEMSTYVETTNSTSNELNTFS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00647 600 FunFam PR5-like receptor kinase 367 574 - -
Phac1g00647 600 Gene3D Transferase(Phosphotransferase) domain 1 367 570 - -
Phac1g00647 600 SMART serkin_6 292 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00647 600 ProSiteProfiles Protein kinase domain profile. 292 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00647 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Phac1g00647 600 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Phac1g00647 600 Pfam Protein tyrosine and serine/threonine kinase 294 562 IPR001245 GO:0004672|GO:0006468
Phac1g00647 600 FunFam serine/threonine-protein kinase PBS1-like 262 366 - -
Phac1g00647 600 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 585 IPR045874 GO:0004672
Phac1g00647 600 Gene3D Phosphorylase Kinase; domain 1 270 366 - -
Phac1g00647 600 SUPERFAMILY Protein kinase-like (PK-like) 273 563 IPR011009 -
Phac1g00647 600 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00647 Phac-Chr1 5139250 5147726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00647 7 587 Receptor kinase-like Gene Family AT5G38260 35.330 1.58e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00647 PK_Tyr_Ser-Thr 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00647 - - vun:114195573 816.994