Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g00647 | ATGATGTGGAGAGAGAGCGCAGTGTTGGTGGTACTGCTACTTCTAGTTCACCATATTTCTGCTACCAAGGACGACCAAGAACACGTTTGTCCTCCTTCTTCCTGTGGAAATATCACCAACATCAGCTATCCATTTCGATTAAAAGGCGACCCAGAAGAGTGTGGTGACAAAAGGTATGAGCTTGGTTGTGTGAATAATGTTACGGTGTTGTATCTGTACTCTGCAAAATATCATGTGGAGGCAATAAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTTCGTTTCCTCTCTCGCTCCAATTTCTCTGACACTTACACTTACACTTCATTTTACGACCCGGGTCCATACCAAGCCAGTTTTGTCTATGAAAATTGGGAATCTCTGAGTTTCAAGCATATAGTGTTTGTGAATTGTAACGATTCGGTGGGAGAGAAAGGGAAGTATGTGGAGATTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCTCAGGACTTAGAACTTGGGTGTGACGTAAAGCTTGTTGCTCCAACTTCTCTCTCCACTTTCGATAACCATTCCTACACTTCCATTCACACCGCACTCGCCTTGGATTCGAGATATCATGGATACAACTCGCCTGTCAGACACATTGTCCAGATGATGATAGCTATTGCTATGTCGACTCTTCTAACCAGAAGCTTCAATGCATCAAAGATTTCATTTTCTCTTTCAACGGTTCACCATGTCAAATATCCCATAAGTAGACTCAAATCTTCGAGCTTGGCACCTATTAGATACTCATACAAGGAAATCAAGAAAATGGCAGCAGGTTTCAAAGAGAAGTTAGGTGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTACTTAGTGGATCTTCTGTGGCCATCAAAATGTTAGGCAAATCCAAAGGAAATGGACAAGATTTTATCAATGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTACGGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTTTATGAATTTATGTCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATTGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGACATCAAACCTCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTAAATCCAATAGATAATAGTATTGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAACTATTTTACAAAAATATTGGAGGAATATCCCATAAAGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAGATGGCGAGCAGGAGGAAGAATCTAAATCCCCATGTAGACCACTCAAGTCAACTTTACTTTCCAATTTGGATCTATGATCATATCGAAGAAGAGGAAGATATAGATATGGAAGATTTGACTGAAGAGGAAAAGATAATAGCAAAGAAAATGATCATAGTGTCTCTTTGGTGCATACAGTTGAAACCAAGCGATCGACCCTCAATGAATAGAGTAGTAGAAATGCTTGAAGGAGACATTGAAGACTTGGAAATACCTCCAAAACCTACTTTATTTCCAGATGAAATGAGTACATATGTTGAAACAACAAACTCGACATCGAATGAATTGAACACGTTCTCTTAA | 1803 | 0.3955 | MMWRESAVLVVLLLLVHHISATKDDQEHVCPPSSCGNITNISYPFRLKGDPEECGDKRYELGCVNNVTVLYLYSAKYHVEAINYKNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTYTSFYDPGPYQASFVYENWESLSFKHIVFVNCNDSVGEKGKYVEIGEWVKWEGKGYAYAIGGDLKAQDLELGCDVKLVAPTSLSTFDNHSYTSIHTALALDSRYHGYNSPVRHIVQMMIAIAMSTLLTRSFNASKISFSLSTVHHVKYPISRLKSSSLAPIRYSYKEIKKMAAGFKEKLGEGGFGSVFKAKLLSGSSVAIKMLGKSKGNGQDFINEVATIGRIHHQNVVRLIGFCVSGSKRALVYEFMSNGSLDKFIFSKERNIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASRRKNLNPHVDHSSQLYFPIWIYDHIEEEEDIDMEDLTEEEKIIAKKMIIVSLWCIQLKPSDRPSMNRVVEMLEGDIEDLEIPPKPTLFPDEMSTYVETTNSTSNELNTFS* | 601 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g00647 | 600 | FunFam | PR5-like receptor kinase | 367 | 574 | - | - | |
Phac1g00647 | 600 | Gene3D | Transferase(Phosphotransferase) domain 1 | 367 | 570 | - | - | |
Phac1g00647 | 600 | SMART | serkin_6 | 292 | 562 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac1g00647 | 600 | ProSiteProfiles | Protein kinase domain profile. | 292 | 577 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac1g00647 | 600 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 412 | 424 | IPR008271 | GO:0004672|GO:0006468 | |
Phac1g00647 | 600 | ProSitePatterns | Protein kinases ATP-binding region signature. | 298 | 320 | IPR017441 | GO:0005524 | |
Phac1g00647 | 600 | Pfam | Protein tyrosine and serine/threonine kinase | 294 | 562 | IPR001245 | GO:0004672|GO:0006468 | |
Phac1g00647 | 600 | FunFam | serine/threonine-protein kinase PBS1-like | 262 | 366 | - | - | |
Phac1g00647 | 600 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 276 | 585 | IPR045874 | GO:0004672 | |
Phac1g00647 | 600 | Gene3D | Phosphorylase Kinase; domain 1 | 270 | 366 | - | - | |
Phac1g00647 | 600 | SUPERFAMILY | Protein kinase-like (PK-like) | 273 | 563 | IPR011009 | - | |
Phac1g00647 | 600 | Pfam | Wall-associated receptor kinase galacturonan-binding | 30 | 93 | IPR025287 | GO:0030247 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g00647 | Phac-Chr1 | 5139250 | 5147726 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g00647 | 7 | 587 | Receptor kinase-like Gene Family | AT5G38260 | 35.330 | 1.58e-116 | 358 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Phac1g00647 | PK_Tyr_Ser-Thr | 9.1e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g00647 | - | - | vun:114195573 | 816.994 |