Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00646 ATGAGAAACAGTTTGGACATGATGTTGTGGAGAGAGAGAGCATTCATGGTGGTACTGCTACTTCTAGTCCACAAAATTCATGGTGGCTGCCCCCCTTCTTCCTGTGGTAAAATCACCAACATAAAGAAACCATTTCGATTAAAAGGCGATCCAGAAGAGTGTGGTGAGGAAAGGTATGAGCTTGGTTGTGAGAATAATGTTACGGTGTTGTATCTGTACTCTGCAAAATATCATGTGCAGTCAATCAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGCTCCAATTTCTCTGATACTTACACTCACACTTCCTTTTACCACTCGGATCCATACCAAGCCGGTCTAAGAGCCTTTGGAAATCGGGAATCTCTGAGTTTCTCGCATATAGTGTTTGTGAATTGTAACCATTCAGTAGGAGAGAAAGGGAAGTATGTGGAGAGTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATTCATATACAATTGGTGGAGAGCTAAAAGCTGAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATTACCATTCCTACTCTTCCATTCACACCGCACTCGCCTTTGGATTTGAGATTTCATGGATACAACTAGCATGTTTGAAACATTGTGCACTTTCCTATATATTTTGCTATTTCGACTCTTCTAACCAGAAGCTTAAATGCGGAAATGGAATACTGGATCAACTAATAGTGCTTGTAACAAGTCTTCTCATATATATCACTATACTATGTGTATGGGCTTACAAAGTTTTGTTTGGGTTGCCATTCTTAATTGTTATTTTTATATGTAAATGGAGAAAAAGACAAACGTCAATGTATGAAAATATTGAAAATTACCTTCAACAAAATAGCTTGGTACCTATTAGATATTCATACAAGGAAATCAAGAACATGGCTGCAGGTTTCAAAGAGAAGTTAGGTGAAGGGGGATTTGGCTCTGTCTTTAAGGCAAAGTTGCGCAGTGGGCCTTCTGTGGCCATCAAAATGTTAGACAAATCTAAAGGAAATGGACAAGATTTTATTAATGAAGTTGCAACCATTGGAAGAACACATCATCAAAATGTGGTACGGTTAATTGGATTTTGTGTCAGTGGCTCAAAGCGTGCTCTTGTGTATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGATAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATCGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGACATCAAACCCCATAACATCTTACTAGATGAAAACTTCATTCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAGTAGATAATAACATCGTCACAGTGACTGTAGCAAGAGGAACTATTGGATATATGGCTCCAGAATTGTTTTATAAAAATATTGGAGGAATATCCCATAAGGCTGATGTTTATAGCTTTGGAATGTTGTTGATGGAAATGACAAGTAAGAGGAAGAATCTAAATCCTCATGCAGACCACTCAAGTCAAATTTACTTTCCCCTTTGGATCTATGATCATATTAGGGAAGGGGAAGATGTAGATGTCGAAAATGTGACTGAAGAGGAAAATAAAATAGCAAAGAAGATGATCATAGTTGCACTGTGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGAGATATTGAAGAGTTGGAAATACCTCCACAACCTATTTTATTTCCAGAAGATGAAATAGTGTCAGAGTATCAAACAATCAACTCTTACTAG 1902 0.3854 MRNSLDMMLWRERAFMVVLLLLVHKIHGGCPPSSCGKITNIKKPFRLKGDPEECGEERYELGCENNVTVLYLYSAKYHVQSINYKNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTHTSFYHSDPYQAGLRAFGNRESLSFSHIVFVNCNHSVGEKGKYVESGEWVKWEGKGYSYTIGGELKAEDLEVGCEVKLVAPTSLSTFDYHSYSSIHTALAFGFEISWIQLACLKHCALSYIFCYFDSSNQKLKCGNGILDQLIVLVTSLLIYITILCVWAYKVLFGLPFLIVIFICKWRKRQTSMYENIENYLQQNSLVPIRYSYKEIKNMAAGFKEKLGEGGFGSVFKAKLRSGPSVAIKMLDKSKGNGQDFINEVATIGRTHHQNVVRLIGFCVSGSKRALVYEFMPNGSLDKFIFSKEINIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPVDNNIVTVTVARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMTSKRKNLNPHADHSSQIYFPLWIYDHIREGEDVDVENVTEEENKIAKKMIIVALWCIQLKPNDRPSMNRVVEMLEGDIEELEIPPQPILFPEDEIVSEYQTINSY* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00646 633 SMART serkin_6 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00646 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Phac1g00646 633 Gene3D Phosphorylase Kinase; domain 1 306 406 - -
Phac1g00646 633 ProSiteProfiles Protein kinase domain profile. 332 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00646 633 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Phac1g00646 633 Pfam Protein kinase domain 335 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00646 633 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Phac1g00646 633 FunFam serine/threonine-protein kinase PBS1-like 299 406 - -
Phac1g00646 633 FunFam PR5-like receptor kinase 407 613 - -
Phac1g00646 633 Gene3D Transferase(Phosphotransferase) domain 1 407 611 - -
Phac1g00646 633 PANTHER RUST RESISTANCE KINASE LR10-RELATED 305 620 IPR045874 GO:0004672
Phac1g00646 633 SUPERFAMILY Protein kinase-like (PK-like) 317 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00646 Phac-Chr1 5111989 5115371 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00646 20 615 Receptor kinase-like Gene Family AT5G38260 36.893 3.47e-117 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00646 Pkinase 4.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00646 - - vun:114195573 882.478