Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00642 ATGCAAAATGGCAAAAAATTTCTGCTTTGGATGTATTATAAGAAGACAAGCCAAAGACTGAGAAACAGTTTAGCCATGATGTGGAGAGAGAGAGCAGTGTTGGTGGTACTGCTACTTCTACTCCACCATATTTCTGCTACCAAGAACGAGCAAGAACACGTTTGTCCTCCTTCTTCCTGTGGTAAAATCACCAACATCAGTTATCCATTTCGGTTAAAAGGCGACCCAGAAAAGTGTGGTGAGGAAAGGTATGAACTTGGTTGTGAGAATAACGTTACGGTGTTGTATCTGTACTCTGCACAATATCATGTGCAGTCAATCAACTACAAGAACTACACGGTGAGAGTGGTTGATCCTTCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGCTCCAATTTCTCTGACACTTACACTTACTACTCGGATCCATACCAAGCCGGTCTAAAAACCTCTGAAAATTCGGAATCTCTCACTTTCCGGCATATAGTGTTTGTGAATTGTAACGATTCGGTGAGAGAGAAAGGGAAGTATGTGGAGATTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCTCAGGACTTAGAAGTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATTACCATTCCTACACTTCCATGCACACTGCACTCGCCTATGGATTTGAGATTTCATGGATGCAACTCGCCTGTCAGAAACATTGTCCAGATGATGATAGCTATTGCTATTTGGACTCTTCTAACCAGACGCTTCAATGCATCAAATGGTCATCATCTGATGAATTAGTGGAATACAATATACCAAGAATTGTCATTTTTATTATCTTTATGGTATGGACTTACAAAGTTTTGTTTGGATTGCCATTCTTAATTGTAATTTTTATATGTAAATGGAGAAAAAGACACATGTCAATGTATGAAAATATTGAAAATTACCTTGAACAAAATAGTTTGGCACCTATTAGATATTCATACAAGGAAATCAAGAAGATGGCTGCAGGTTTCAAAGAGAAGTTAGGAGAAGGAGGATTCGGCTCTGTCTTTAAGGCAAAGTTACTTAGTGGACCTTCTGTGGCCATCAAAATGTTAGGCAAATCCAAAGGAAATGGACAAGATTTTATCAGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTAAGGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTTTATATGAATTCATGCCTAATGGATCTCTTGATAAATTTATTTTCTCAAAAGATGGAAGTGTACATTTAAGTTATGAAAAGATATATAATATATCAATAGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGGTGTGAGATGCAAATTTTGCATTTTGATATCAAACCTCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATCGTCACAATGACTGCAGCAAGAGGAACCATTGGATATATGGCTCCAGAATTGTTTTATAATAATATTGGAGGAATATCCTATAAGGCTGATGTTTATAGCTTTGGAATGTTATTGATGGAGATGGCAAGTAAGAGGAAAAATCTAAATACTCATGCAGATCATTCAAGTCAACTTTACTTTCCTCTTTGGATCCATGATCATATTCGGGAAGAGGAAGATGTAGATATCAAAGATGCGACAGAAGAGGAAAATAAAATAGCAAAGAAAATGATCATAGTTGCACTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGAGATATTGAAGACTTGGAAATACCTCCAAAACCTATTCTATTTCCAGATGAAACAGGGACAGAGGATCAAACAATCAACTCTAGCTAG 1965 0.3827 MQNGKKFLLWMYYKKTSQRLRNSLAMMWRERAVLVVLLLLLHHISATKNEQEHVCPPSSCGKITNISYPFRLKGDPEKCGEERYELGCENNVTVLYLYSAQYHVQSINYKNYTVRVVDPSLQHHNLSSLPLRFLSRSNFSDTYTYYSDPYQAGLKTSENSESLTFRHIVFVNCNDSVREKGKYVEIGEWVKWEGKGYAYAIGGDLKAQDLEVGCEVKLVAPTSLSTFDYHSYTSMHTALAYGFEISWMQLACQKHCPDDDSYCYLDSSNQTLQCIKWSSSDELVEYNIPRIVIFIIFMVWTYKVLFGLPFLIVIFICKWRKRHMSMYENIENYLEQNSLAPIRYSYKEIKKMAAGFKEKLGEGGFGSVFKAKLLSGPSVAIKMLGKSKGNGQDFISEVATIGRIHHQNVVRLIGFCVSGSKRALLYEFMPNGSLDKFIFSKDGSVHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYNNIGGISYKADVYSFGMLLMEMASKRKNLNTHADHSSQLYFPLWIHDHIREEEDVDIKDATEEENKIAKKMIIVALWCIQLKPNDRPSMNRVVEMLEGDIEDLEIPPKPILFPDETGTEDQTINSS* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00642 654 MobiDBLite consensus disorder prediction 635 654 - -
Phac1g00642 654 SUPERFAMILY Protein kinase-like (PK-like) 339 625 IPR011009 -
Phac1g00642 654 CDD STKc_IRAK 360 626 - -
Phac1g00642 654 ProSiteProfiles Protein kinase domain profile. 354 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00642 654 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Phac1g00642 654 Pfam Wall-associated receptor kinase galacturonan-binding 55 118 IPR025287 GO:0030247
Phac1g00642 654 FunFam serine/threonine-protein kinase PBS1-like 322 428 - -
Phac1g00642 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Phac1g00642 654 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
Phac1g00642 654 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Phac1g00642 654 FunFam PR5-like receptor kinase 429 636 - -
Phac1g00642 654 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00642 654 PANTHER RUST RESISTANCE KINASE LR10-RELATED 327 643 IPR045874 GO:0004672
Phac1g00642 654 Pfam Protein kinase domain 357 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00642 Phac-Chr1 5058710 5071668 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00642 32 637 Receptor kinase-like Gene Family AT5G38260 35.556 2.05e-115 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00642 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00642 - - vun:114195573 948.347