Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00640 ATGAGAAACAGTTTGGACATGATGTGGAGAGAGAGGGCATTCATGGTGGTACTGCTACTTCTAGTCCAGAAAATTCATGGTGGCTGCCCCTCCTCTTCCTGTGGTCAAATCACCAACATCAATTACCCATTTCGATTAAAAGGCGACCCAGAAGAGTGCGGAAAGGAAAGGTATGAGCTTGGTTGTGAGAATAACGTTACGGTGTTGCATCTGTACTCTGCACAATATCATGTGCAGTCGATCAACTACAAGAACTACACAGTGAGAGTGGTTGATCCTGCTCTTCAACACCATAATCTCTCCTCCCTTCCTCTCCGTTTCCTCTCTCGCTCCAATTTCTCTGACACTTACACTCACACTTCCTTTTACGACTCGGATGCATACCAAGCCGGTCTAAGACCCTTTGAAAATTGGGAATCTCTGAGTTTCTCGCATATAGTGTTTGTGAATTGTAACGATTCGGTGGGAGAGAAAGGGAAGTATGTGGAGATTGGAGAGTGGGTGAAGTGGGAGGGGAAGGGGTATGCATATGCAATTGGTGGAGACCTAAAAGCTCAGGACTTAGAACTTGGGTGTGAGGTAAAGCTTGTTGCTCCCACTTCTCTCTCCACTTTCGATAACCATTCCTACTCTTCCATTCACACCGCACTCGCCTATGGATTTGAGGTTTCATGGATACAATTCGCCTGTCAGAAACATTGTTCACCTTACGATAGAAAATGCTATTTCGACTCTTCTAAACAGAAGCTTAAATGCGGGTATGGTCCTCTCATATATATCTCAATAATATGGGCTCACAAAGTTTTGTTTGGATTGCCATTCTTAATTGTTATTTTTATATGTAAATGGAGAAAAAGACATATGTCAATGTATGAAAATATTGAAAATTACCTTGAACAAAATAGTTTGGCACCTATTAGATACTCATACAAGGAAATCAAGAAGATGGCTGCAGGTTTCAAAGAGAAGTTAGGAGAAGGAGGATTTGGCTCTGTCTTTAAGGCAAAGTTACTTAGTGGACCTTCTGTGGCCATCAAAATGTTAGGCAAATCCAAAGGAAATGGACAAGATTTTATCAGTGAAGTTGCAACCATTGGAAGAATACATCATCAAAATGTGGTAAGGTTAATTGGATTTTGTGTTAGTGGCTCAAAGCGTGCTCTTGTATATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTTTCTCAAAAGAGAGAAATATACATTTAAGCTATGAAAAGATATATAATATATCAATCGGAGTGGCTCGTGGGATTGCTTATCTCCACCATGGATGTGAGATGCAAATTTTACATTTTGACATCAAACCCCATAACATCTTACTAGATGAAAACTTCATCCCTAAGGTTTCTGACTTTGGATTGGCAAAGTTATATCCAATAGATAATAGCATCGTCACCATGACTGCAGCAAGAGGAACCATTGGATACATGGCTCCAGAATTGTTTTATAATAATATTGGAGGAATATCCCATAAGGCTGATGTTTATAGCTTCGGAATGTTGTTGATGGAGATGGCAAGTAAGAGGAAGAATCTAAATCCTCATGCAAACCACTCAAGTCAACTTTACTTTCCCCTTTGGATCTATGATCATATTAGGGAAGGGGAAGATGTAGATGTCGAAGATGTGACAAAAGAGGAAAATAAAATAGCAAAGAAAATGATCATAGTTGCATTATGGTGTATACAACTAAAACCAAATGATCGACCCTCAATGAATAGAGTAGTGGAAATGCTTGAAGGGAATATTGAAGACTTGAAAATACCTCCAAAACCTATTCTATTTCCAGAAGATGAAACAATGACAGAGTATCAAACAACCAACTCTAGCTATAACTAG 1866 0.3923 MRNSLDMMWRERAFMVVLLLLVQKIHGGCPSSSCGQITNINYPFRLKGDPEECGKERYELGCENNVTVLHLYSAQYHVQSINYKNYTVRVVDPALQHHNLSSLPLRFLSRSNFSDTYTHTSFYDSDAYQAGLRPFENWESLSFSHIVFVNCNDSVGEKGKYVEIGEWVKWEGKGYAYAIGGDLKAQDLELGCEVKLVAPTSLSTFDNHSYSSIHTALAYGFEVSWIQFACQKHCSPYDRKCYFDSSKQKLKCGYGPLIYISIIWAHKVLFGLPFLIVIFICKWRKRHMSMYENIENYLEQNSLAPIRYSYKEIKKMAAGFKEKLGEGGFGSVFKAKLLSGPSVAIKMLGKSKGNGQDFISEVATIGRIHHQNVVRLIGFCVSGSKRALVYEFMPNGSLDKFIFSKERNIHLSYEKIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYNNIGGISHKADVYSFGMLLMEMASKRKNLNPHANHSSQLYFPLWIYDHIREGEDVDVEDVTKEENKIAKKMIIVALWCIQLKPNDRPSMNRVVEMLEGNIEDLKIPPKPILFPEDETMTEYQTTNSSYN* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00640 621 Gene3D Phosphorylase Kinase; domain 1 291 392 - -
Phac1g00640 621 SMART serkin_6 318 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00640 621 PANTHER RUST RESISTANCE KINASE LR10-RELATED 291 609 IPR045874 GO:0004672
Phac1g00640 621 FunFam PR5-like receptor kinase 393 600 - -
Phac1g00640 621 SUPERFAMILY Protein kinase-like (PK-like) 303 589 IPR011009 -
Phac1g00640 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Phac1g00640 621 FunFam serine/threonine-protein kinase PBS1-like 286 392 - -
Phac1g00640 621 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
Phac1g00640 621 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Phac1g00640 621 Pfam Protein kinase domain 321 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00640 621 Gene3D Transferase(Phosphotransferase) domain 1 393 597 - -
Phac1g00640 621 ProSiteProfiles Protein kinase domain profile. 318 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00640 Phac-Chr1 5042409 5045778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00640 30 601 Receptor kinase-like Gene Family AT5G38260 36.772 5.77e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac1g00640 Pkinase 8.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00640 - - vun:114195573 895.575