Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00624 ATGAAAACGAAGCTTCTTCTTTTGCTTCTCATGCTCCTCCTTGTTCTCCAAAAACCCATTTGGACTTTTGCCTCACCATACCCTCTTGCGCCCTCACCTCAAGGTCCACCCTTTTCTCCATTTCCCAATTCAATGTCTGCTTCCTCTCCAGCAATTGTGATGGGGGCTGAAGAGCAGCAAATAGATTCGCACAAGAAAATGGTAATTGCTATTGCCGTAGCCAGCACTTCACTTGGTGCAATCATTTTGAGTGTGTTGTGCATCTGGATTTATCATACCAAGTACCCTTCAAAATCCAAAGGGAAAAACGTTCAAAGATCAGATGCTGAGAAAGGGCTAGATTCATCACCAACTTTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAAGTCACGGGCAATTACAAGGAAAGTAACATCTTGGGTGAGGGAGGTTTTGGATGTGTTTACAAAGCACATTTGGCTGATAATTTGGAAGTTGCCGTTAAGAAATTGCACTGTGAAAATCAGTATGCTGAGCAAGAATATGAGAACGAGGTGGAATTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGATGTAGCAGTAATGAAGATACAAGGATTATTGTCTATGAATTGATGCATAATGGATCATTGGAAACTCAATTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCATTTGAGGATGAAAATTGCTCTTGACACAGCAAGGGGATTAAAATATCTGCATGAACACTGTTACCCTCCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTGGATACAAAGTTCAATGCCAAGGTAAAACAAAAAGGCCATGTTCAATTTGCTGCATTTATTATTCTCTTTTTGTACCATACATTTTTATTGTGTTCACAAAAGCTTCTTTTCTGCCTGCTATTACTGGTGGATTCAGCTTTCTGA 990 0.3889 MKTKLLLLLLMLLLVLQKPIWTFASPYPLAPSPQGPPFSPFPNSMSASSPAIVMGAEEQQIDSHKKMVIAIAVASTSLGAIILSVLCIWIYHTKYPSKSKGKNVQRSDAEKGLDSSPTLSKFSSIKLVGKKGCVPIIDYKQIEKVTGNYKESNILGEGGFGCVYKAHLADNLEVAVKKLHCENQYAEQEYENEVELLSKIQHPNVISLLGCSSNEDTRIIVYELMHNGSLETQLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLDTKFNAKVKQKGHVQFAAFIILFLYHTFLLCSQKLLFCLLLLVDSAF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00624 329 FunFam Protein kinase superfamily protein 116 224 - -
Phac1g00624 329 Gene3D Phosphorylase Kinase; domain 1 113 224 - -
Phac1g00624 329 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 50 290 - -
Phac1g00624 329 SMART serkin_6 149 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00624 329 Gene3D Transferase(Phosphotransferase) domain 1 225 301 - -
Phac1g00624 329 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Phac1g00624 329 MobiDBLite consensus disorder prediction 98 117 - -
Phac1g00624 329 Coils Coil 169 189 - -
Phac1g00624 329 ProSiteProfiles Protein kinase domain profile. 149 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00624 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Phac1g00624 329 Pfam Protein kinase domain 149 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00624 329 SUPERFAMILY Protein kinase-like (PK-like) 131 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00624 Phac-Chr1 4937781 4943500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00624 27 294 Receptor kinase-like Gene Family AT1G80640 45.387 9.87e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Phac1g00624 Pkinase 2.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00624 - - vra:106764755 498.819