Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00622 ATGAAAACGAAGCTTCTTCTTTTGCTTCTCATGCTCCTCCTTGTTCTCCAAAAACCCATTTGGACTTTTGCCTCACCATACCCTCTTGCGCCCTCACCTCAAGGTCCACCCTTTTCTCCATTTCCCAATTCAATGTCTGCTTCCTCTCCAGCAATTGTGATGGGGGCTGAAGAGCAGCAAATAGATTCGCACAAGAAAATGGTAATTGCTATTGCCGTAGCCAGCACTTCACTTGGTGCAATCATTTTGAGTGTGTTGTGCATCTGGATTTATCATACCAAGTACCCTTCAAAATCCAAAGGGAAAAACGTTCAAAGATCAGATGCTGAGAAAGGGCTAGATTCATCACCAACTTTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAAGTCACGGGCAATTACAAGGAAAGTAACATCTTGGGTGAGGGAGGTTTTGGATGTGTTTACAAAGCACATTTGGCTGATAATTTGGAAGTTGCCGTTAAGAAATTGCACTGTGAAAATCAGTATGCTGAGCAAGAATATGAGAACGAGGTGGAATTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGATGTAGCAGTAATGAAGATACAAGGATTATTGTCTATGAATTGATGCATAATGGATCATTGGAAACTCAATTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCATTTGAGGATGAAAATTGCTCTTGACACAGCAAGGGGATTAAAATATCTGCATGAACACTGTTACCCTCCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTGGATACAAAGTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACCAATGGGACCCAAAACAAGAATAATATCAAGCTTTCAGGCACGTTGGGTTACGTAGCCCCAGAGTATCTTTTAGATGATAAAAGTGATGTATATGCTTTTGGAGTTGTGCTGTTGGAGCTTCTCTTGGGAAAGAAGCCTGTGGAAAAACTAGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGACAAAAGCTTCCAAACATCGTGGATCCTGTAATTAAGAATACAATGGACCCCAAACACTTATACCAGGTTGCGGCAGTGGCAGTGTTGTGCGTGCAACCAGAGCCAAGTTACCGTCCCCTGATTGCAGATGTTCTCCACTCACTTATCCCTCTTGTCCCCGTAGAGCTTGGAGGAACACTCAAAGTCGCACAACTGCCACAGCAAGTCTTACCTGCTAACCCACATGAGGATTCTAGTCCATGA 1344 0.4204 MKTKLLLLLLMLLLVLQKPIWTFASPYPLAPSPQGPPFSPFPNSMSASSPAIVMGAEEQQIDSHKKMVIAIAVASTSLGAIILSVLCIWIYHTKYPSKSKGKNVQRSDAEKGLDSSPTLSKFSSIKLVGKKGCVPIIDYKQIEKVTGNYKESNILGEGGFGCVYKAHLADNLEVAVKKLHCENQYAEQEYENEVELLSKIQHPNVISLLGCSSNEDTRIIVYELMHNGSLETQLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLDTKFNAKLSDFGLAITNGTQNKNNIKLSGTLGYVAPEYLLDDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRQKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVAQLPQQVLPANPHEDSSP* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00622 447 FunFam Protein kinase superfamily protein 116 224 - -
Phac1g00622 447 Pfam Protein kinase domain 149 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00622 447 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Phac1g00622 447 MobiDBLite consensus disorder prediction 98 117 - -
Phac1g00622 447 Gene3D Phosphorylase Kinase; domain 1 113 224 - -
Phac1g00622 447 Coils Coil 169 189 - -
Phac1g00622 447 ProSiteProfiles Protein kinase domain profile. 149 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00622 447 SMART serkin_6 149 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00622 447 Gene3D Transferase(Phosphotransferase) domain 1 225 420 - -
Phac1g00622 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Phac1g00622 447 SUPERFAMILY Protein kinase-like (PK-like) 131 415 IPR011009 -
Phac1g00622 447 PANTHER OS01G0750732 PROTEIN 50 418 - -
Phac1g00622 447 FunFam probable receptor-like protein kinase At1g80640 225 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00622 Phac-Chr1 4937781 4943500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00622 27 361 Receptor kinase-like Gene Family AT1G80640 48.256 3.01e-93 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Phac1g00622 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00622 - - vra:106764755 793.112